Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.89■□□□□ 0.77
PCK1P35558 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.89■□□□□ 0.77
PCK1P35558 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCK1P35558 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.89■□□□□ 0.77
PCK1P35558 AC073195.1-201ENST00000607241 877 ntBASIC19.89■□□□□ 0.77
PCK1P35558 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCK1P35558 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PCK1P35558 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCK1P35558 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCK1P35558 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCK1P35558 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCK1P35558 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCK1P35558 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.88■□□□□ 0.77
PCK1P35558 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.88■□□□□ 0.77
PCK1P35558 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.88■□□□□ 0.77
PCK1P35558 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.88■□□□□ 0.77
PCK1P35558 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCK1P35558 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.88■□□□□ 0.77
PCK1P35558 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.87■□□□□ 0.77
PCK1P35558 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 AC005082.1-201ENST00000413042 2259 ntBASIC19.87■□□□□ 0.77
PCK1P35558 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 AL135905.2-201ENST00000584934 1404 ntBASIC19.87■□□□□ 0.77
PCK1P35558 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 NEFHP1-201ENST00000412845 2629 ntBASIC19.87■□□□□ 0.77
PCK1P35558 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 AC098590.1-201ENST00000468126 897 ntBASIC19.87■□□□□ 0.77
PCK1P35558 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCK1P35558 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.87■□□□□ 0.77
PCK1P35558 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.87■□□□□ 0.77
PCK1P35558 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.87■□□□□ 0.77
PCK1P35558 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
PCK1P35558 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.87■□□□□ 0.77
PCK1P35558 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCK1P35558 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCK1P35558 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PCK1P35558 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
PCK1P35558 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCK1P35558 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.86■□□□□ 0.77
PCK1P35558 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.86■□□□□ 0.77
PCK1P35558 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.86■□□□□ 0.77
PCK1P35558 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PCK1P35558 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.86■□□□□ 0.77
PCK1P35558 GCSHP5-201ENST00000443090 522 ntBASIC19.86■□□□□ 0.77
PCK1P35558 AC142381.4-202ENST00000563973 229 ntBASIC19.86■□□□□ 0.77
PCK1P35558 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.86■□□□□ 0.77
PCK1P35558 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.86■□□□□ 0.77
PCK1P35558 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.86■□□□□ 0.77
PCK1P35558 CR392000.1-201ENST00000624770 1228 ntBASIC19.86■□□□□ 0.77
PCK1P35558 AL031985.4-201ENST00000642138 673 ntBASIC19.86■□□□□ 0.77
PCK1P35558 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCK1P35558 RCC2P6-201ENST00000526625 1557 ntBASIC19.86■□□□□ 0.77
PCK1P35558 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCK1P35558 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.85■□□□□ 0.77
PCK1P35558 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 KRT8P11-201ENST00000409686 1436 ntBASIC19.85■□□□□ 0.77
PCK1P35558 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.85■□□□□ 0.77
PCK1P35558 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCK1P35558 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCK1P35558 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms