Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA6P31267 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA6P31267 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA6P31267 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA6P31267 MIR574-201ENST00000385209 96 ntBASIC18.66■□□□□ 0.58
HOXA6P31267 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA6P31267 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA6P31267 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA6P31267 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA6P31267 AL592071.1-201ENST00000611956 408 ntBASIC18.66■□□□□ 0.58
HOXA6P31267 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HOXA6P31267 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXA6P31267 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.66■□□□□ 0.58
HOXA6P31267 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA6P31267 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA6P31267 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA6P31267 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA6P31267 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA6P31267 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA6P31267 AC073314.1-201ENST00000568729 2216 ntBASIC18.66■□□□□ 0.58
HOXA6P31267 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA6P31267 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA6P31267 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 KRT89P-201ENST00000620027 1478 ntBASIC18.65■□□□□ 0.58
HOXA6P31267 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA6P31267 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HOXA6P31267 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA6P31267 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA6P31267 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXA6P31267 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA6P31267 AP001005.1-201ENST00000571755 1248 ntBASIC18.65■□□□□ 0.58
HOXA6P31267 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA6P31267 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.65■□□□□ 0.58
HOXA6P31267 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA6P31267 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA6P31267 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA6P31267 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXA6P31267 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXA6P31267 AL512353.2-201ENST00000448759 1962 ntBASIC18.64■□□□□ 0.58
HOXA6P31267 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXA6P31267 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXA6P31267 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HOXA6P31267 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HOXA6P31267 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXA6P31267 KRT18P13-201ENST00000400056 1290 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 POM121L3P-201ENST00000419331 1163 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 AF238378.1-201ENST00000526806 358 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 AF228730.7-201ENST00000641842 219 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXA6P31267 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXA6P31267 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA6P31267 RCC2P3-201ENST00000418112 1537 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.57
HOXA6P31267 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA6P31267 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA6P31267 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA6P31267 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 AL773604.1-201ENST00000617417 272 ntBASIC18.63■□□□□ 0.57
HOXA6P31267 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA6P31267 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms