Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 AC117947.1-201ENST00000427448 529 ntBASIC17.14■□□□□ 0.33
GDF1P27539 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.14■□□□□ 0.33
GDF1P27539 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.14■□□□□ 0.33
GDF1P27539 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 MIR4674-201ENST00000582457 87 ntBASIC17.14■□□□□ 0.33
GDF1P27539 AC008622.2-201ENST00000617006 1229 ntBASIC17.14■□□□□ 0.33
GDF1P27539 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
GDF1P27539 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GDF1P27539 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
GDF1P27539 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.14■□□□□ 0.33
GDF1P27539 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.14■□□□□ 0.33
GDF1P27539 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GDF1P27539 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GDF1P27539 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GDF1P27539 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
GDF1P27539 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.13■□□□□ 0.33
GDF1P27539 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.13■□□□□ 0.33
GDF1P27539 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.13■□□□□ 0.33
GDF1P27539 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.13■□□□□ 0.33
GDF1P27539 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GDF1P27539 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
GDF1P27539 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GDF1P27539 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.13■□□□□ 0.33
GDF1P27539 YBX1P2-201ENST00000489612 999 ntBASIC17.13■□□□□ 0.33
GDF1P27539 KRT18P35-201ENST00000510488 1269 ntBASIC17.13■□□□□ 0.33
GDF1P27539 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.13■□□□□ 0.33
GDF1P27539 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.13■□□□□ 0.33
GDF1P27539 LINC01238-205ENST00000567549 1107 ntBASIC17.13■□□□□ 0.33
GDF1P27539 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 AL445228.2-201ENST00000605589 952 ntBASIC17.13■□□□□ 0.33
GDF1P27539 AC140113.3-201ENST00000605663 199 ntBASIC17.13■□□□□ 0.33
GDF1P27539 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.13■□□□□ 0.33
GDF1P27539 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
GDF1P27539 GPAT2P1-201ENST00000444924 1672 ntBASIC17.13■□□□□ 0.33
GDF1P27539 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.13■□□□□ 0.33
GDF1P27539 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 KRT8P3-201ENST00000519669 1449 ntBASIC17.13■□□□□ 0.33
GDF1P27539 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDF1P27539 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
GDF1P27539 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GDF1P27539 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.12■□□□□ 0.33
GDF1P27539 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 IRX1P1-201ENST00000438849 1838 ntBASIC17.12■□□□□ 0.33
GDF1P27539 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 ARMC10P1-201ENST00000313754 855 ntBASIC17.12■□□□□ 0.33
GDF1P27539 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.12■□□□□ 0.33
GDF1P27539 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.12■□□□□ 0.33
GDF1P27539 AC009947.2-201ENST00000444014 672 ntBASIC17.12■□□□□ 0.33
GDF1P27539 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 AC092647.4-201ENST00000457211 535 ntBASIC17.12■□□□□ 0.33
GDF1P27539 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GDF1P27539 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.12■□□□□ 0.33
GDF1P27539 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 FEM1AP3-201ENST00000403722 1741 ntBASIC17.12■□□□□ 0.33
GDF1P27539 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.12■□□□□ 0.33
GDF1P27539 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDF1P27539 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
GDF1P27539 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
GDF1P27539 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.11■□□□□ 0.33
GDF1P27539 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 RNF152P1-201ENST00000397754 604 ntBASIC17.11■□□□□ 0.33
GDF1P27539 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.11■□□□□ 0.33
GDF1P27539 MCCD1P1-208ENST00000445732 328 ntBASIC17.11■□□□□ 0.33
GDF1P27539 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms