Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP4AP20648 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP4AP20648 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 MCCD1P1-208ENST00000445732 328 ntBASIC20.97■□□□□ 0.95
ATP4AP20648 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP4AP20648 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP4AP20648 HOMER2P1-201ENST00000455653 964 ntBASIC20.97■□□□□ 0.95
ATP4AP20648 AC092647.4-201ENST00000457211 535 ntBASIC20.97■□□□□ 0.95
ATP4AP20648 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP4AP20648 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.97■□□□□ 0.95
ATP4AP20648 LINC01238-205ENST00000567549 1107 ntBASIC20.97■□□□□ 0.95
ATP4AP20648 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP4AP20648 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
ATP4AP20648 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP4AP20648 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ATP4AP20648 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP4AP20648 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ATP4AP20648 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP4AP20648 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATP4AP20648 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP4AP20648 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP4AP20648 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP4AP20648 AP000523.1-201ENST00000398242 1049 ntBASIC20.96■□□□□ 0.95
ATP4AP20648 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP4AP20648 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP4AP20648 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP4AP20648 MIR3180-5-201ENST00000583743 153 ntBASIC20.96■□□□□ 0.95
ATP4AP20648 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP4AP20648 HYMAI.1-201ENST00000620949 238 ntBASIC20.96■□□□□ 0.95
ATP4AP20648 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATP4AP20648 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP4AP20648 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATP4AP20648 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP4AP20648 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.95■□□□□ 0.95
ATP4AP20648 AC008556.1-201ENST00000610908 2040 ntBASIC20.95■□□□□ 0.94
ATP4AP20648 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 RCC2P3-201ENST00000418112 1537 ntBASIC20.95■□□□□ 0.94
ATP4AP20648 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
ATP4AP20648 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP4AP20648 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.95■□□□□ 0.94
ATP4AP20648 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP4AP20648 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP4AP20648 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP4AP20648 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP4AP20648 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ATP4AP20648 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ATP4AP20648 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP4AP20648 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP4AP20648 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP4AP20648 KRT8P32-201ENST00000512863 1461 ntBASIC20.94■□□□□ 0.94
ATP4AP20648 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.94■□□□□ 0.94
ATP4AP20648 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP4AP20648 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP4AP20648 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP4AP20648 SPDYE15P-201ENST00000424157 909 ntBASIC20.94■□□□□ 0.94
ATP4AP20648 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP4AP20648 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP4AP20648 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP4AP20648 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP4AP20648 AC005332.7-201ENST00000614046 2005 ntBASIC20.94■□□□□ 0.94
ATP4AP20648 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP4AP20648 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP4AP20648 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms