Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
BMP3P12645 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
BMP3P12645 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
BMP3P12645 UPK3BP1-201ENST00000428678 509 ntBASIC21.81■■□□□ 1.08
BMP3P12645 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.81■■□□□ 1.08
BMP3P12645 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.81■■□□□ 1.08
BMP3P12645 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BMP3P12645 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.81■■□□□ 1.08
BMP3P12645 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
BMP3P12645 AC083849.1-201ENST00000615227 514 ntBASIC21.81■■□□□ 1.08
BMP3P12645 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.81■■□□□ 1.08
BMP3P12645 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BMP3P12645 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.81■■□□□ 1.08
BMP3P12645 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
BMP3P12645 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BMP3P12645 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.8■■□□□ 1.08
BMP3P12645 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 AC008556.1-201ENST00000610908 2040 ntBASIC21.8■■□□□ 1.08
BMP3P12645 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 AC007952.6-201ENST00000573168 2673 ntBASIC21.8■■□□□ 1.08
BMP3P12645 AC003957.1-201ENST00000625108 2673 ntBASIC21.8■■□□□ 1.08
BMP3P12645 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.8■■□□□ 1.08
BMP3P12645 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.8■■□□□ 1.08
BMP3P12645 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.8■■□□□ 1.08
BMP3P12645 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.8■■□□□ 1.08
BMP3P12645 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
BMP3P12645 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.8■■□□□ 1.08
BMP3P12645 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BMP3P12645 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.8■■□□□ 1.08
BMP3P12645 LINC01311-201ENST00000565162 1445 ntBASIC21.8■■□□□ 1.08
BMP3P12645 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
BMP3P12645 AC005332.1-201ENST00000577698 1310 ntBASIC21.8■■□□□ 1.08
BMP3P12645 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
BMP3P12645 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.79■■□□□ 1.08
BMP3P12645 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 KRT8P32-201ENST00000512863 1461 ntBASIC21.79■■□□□ 1.08
BMP3P12645 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.79■■□□□ 1.08
BMP3P12645 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.79■■□□□ 1.08
BMP3P12645 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 RASA4DP-201ENST00000460726 1199 ntBASIC21.79■■□□□ 1.08
BMP3P12645 AC034232.1-201ENST00000506026 1064 ntBASIC21.79■■□□□ 1.08
BMP3P12645 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 ZNF444P1-201ENST00000559497 298 ntBASIC21.79■■□□□ 1.08
BMP3P12645 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
BMP3P12645 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.79■■□□□ 1.08
BMP3P12645 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
BMP3P12645 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BMP3P12645 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.79■■□□□ 1.08
BMP3P12645 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
BMP3P12645 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.79■■□□□ 1.08
BMP3P12645 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BMP3P12645 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BMP3P12645 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BMP3P12645 IER3-202ENST00000376377 1350 ntBASIC21.78■■□□□ 1.08
BMP3P12645 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BMP3P12645 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 SEC1P-202ENST00000473944 940 ntBASIC21.78■■□□□ 1.08
BMP3P12645 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BMP3P12645 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.78■■□□□ 1.08
BMP3P12645 AL136038.3-201ENST00000561909 1096 ntBASIC21.78■■□□□ 1.08
BMP3P12645 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.78■■□□□ 1.08
BMP3P12645 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms