Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 AC096631.2-201ENST00000436136 790 ntBASIC14.67□□□□□ -0.06
CXCL1P09341 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL1P09341 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL1P09341 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL1P09341 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL1P09341 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CXCL1P09341 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL1P09341 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CXCL1P09341 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL1P09341 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCL1P09341 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.66□□□□□ -0.06
CXCL1P09341 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.66□□□□□ -0.06
CXCL1P09341 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCL1P09341 AL136967.2-201ENST00000623968 743 ntBASIC14.66□□□□□ -0.06
CXCL1P09341 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CXCL1P09341 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCL1P09341 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.66□□□□□ -0.06
CXCL1P09341 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL1P09341 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CXCL1P09341 AC087633.2-202ENST00000565166 1439 ntBASIC14.66□□□□□ -0.06
CXCL1P09341 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CXCL1P09341 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCL1P09341 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CXCL1P09341 AP001271.2-201ENST00000624018 1556 ntBASIC14.65□□□□□ -0.06
CXCL1P09341 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCL1P09341 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.65□□□□□ -0.06
CXCL1P09341 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.65□□□□□ -0.06
CXCL1P09341 AC027612.3-201ENST00000413684 1047 ntBASIC14.65□□□□□ -0.06
CXCL1P09341 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.65□□□□□ -0.06
CXCL1P09341 AL356652.1-201ENST00000615962 565 ntBASIC14.65□□□□□ -0.06
CXCL1P09341 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCL1P09341 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 UBALD1-205ENST00000590891 2641 ntBASIC14.65□□□□□ -0.06
CXCL1P09341 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCL1P09341 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CXCL1P09341 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CXCL1P09341 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCL1P09341 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCL1P09341 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CXCL1P09341 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCL1P09341 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms