Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
COL5A2P05997 AP001005.1-201ENST00000571755 1248 ntBASIC24.89■■□□□ 1.57
COL5A2P05997 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.89■■□□□ 1.57
COL5A2P05997 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL5A2P05997 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
COL5A2P05997 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
COL5A2P05997 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL5A2P05997 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL5A2P05997 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL5A2P05997 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL5A2P05997 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL5A2P05997 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.88■■□□□ 1.57
COL5A2P05997 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL5A2P05997 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.88■■□□□ 1.57
COL5A2P05997 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
COL5A2P05997 AF228730.7-201ENST00000641842 219 ntBASIC24.88■■□□□ 1.57
COL5A2P05997 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
COL5A2P05997 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.87■■□□□ 1.57
COL5A2P05997 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL5A2P05997 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC24.87■■□□□ 1.57
COL5A2P05997 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.87■■□□□ 1.57
COL5A2P05997 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC24.87■■□□□ 1.57
COL5A2P05997 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.87■■□□□ 1.57
COL5A2P05997 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.86■■□□□ 1.57
COL5A2P05997 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 KRT18P13-201ENST00000400056 1290 ntBASIC24.86■■□□□ 1.57
COL5A2P05997 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.86■■□□□ 1.57
COL5A2P05997 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.86■■□□□ 1.57
COL5A2P05997 AL773604.1-201ENST00000617417 272 ntBASIC24.86■■□□□ 1.57
COL5A2P05997 AC117500.6-201ENST00000624871 588 ntBASIC24.86■■□□□ 1.57
COL5A2P05997 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.86■■□□□ 1.57
COL5A2P05997 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC24.86■■□□□ 1.57
COL5A2P05997 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
COL5A2P05997 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.86■■□□□ 1.57
COL5A2P05997 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL5A2P05997 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.86■■□□□ 1.57
COL5A2P05997 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.85■■□□□ 1.57
COL5A2P05997 TEX21P-204ENST00000641479 1693 ntBASIC24.85■■□□□ 1.57
COL5A2P05997 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
COL5A2P05997 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
COL5A2P05997 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.85■■□□□ 1.57
COL5A2P05997 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.85■■□□□ 1.57
COL5A2P05997 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.85■■□□□ 1.57
COL5A2P05997 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC24.85■■□□□ 1.57
COL5A2P05997 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC24.85■■□□□ 1.57
COL5A2P05997 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.85■■□□□ 1.57
COL5A2P05997 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL5A2P05997 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 EMD-201ENST00000369835 966 ntTSL 3 BASIC24.84■■□□□ 1.57
COL5A2P05997 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
COL5A2P05997 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC24.84■■□□□ 1.57
COL5A2P05997 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.84■■□□□ 1.57
COL5A2P05997 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.84■■□□□ 1.57
COL5A2P05997 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.84■■□□□ 1.57
COL5A2P05997 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL5A2P05997 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.83■■□□□ 1.57
COL5A2P05997 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.83■■□□□ 1.57
COL5A2P05997 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL5A2P05997 NAT14-202ENST00000587400 416 ntTSL 5 BASIC24.83■■□□□ 1.57
COL5A2P05997 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC24.83■■□□□ 1.57
COL5A2P05997 AC124864.1-201ENST00000623408 392 ntBASIC24.83■■□□□ 1.57
COL5A2P05997 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL5A2P05997 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL5A2P05997 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.83■■□□□ 1.57
COL5A2P05997 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL5A2P05997 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL5A2P05997 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms