Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.27■□□□□ 0.36
P04436 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.27■□□□□ 0.36
P04436 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.27■□□□□ 0.36
P04436 AC139887.4-201ENST00000607877 719 ntBASIC17.27■□□□□ 0.36
P04436 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
P04436 AC008622.2-201ENST00000617006 1229 ntBASIC17.27■□□□□ 0.36
P04436 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.27■□□□□ 0.36
P04436 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.27■□□□□ 0.36
P04436 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
P04436 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
P04436 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P04436 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
P04436 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04436 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04436 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04436 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
P04436 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.27■□□□□ 0.35
P04436 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 AC093484.2-201ENST00000580996 2166 ntBASIC17.26■□□□□ 0.35
P04436 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P04436 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
P04436 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
P04436 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.26■□□□□ 0.35
P04436 RNF152P1-201ENST00000397754 604 ntBASIC17.26■□□□□ 0.35
P04436 AC117947.1-201ENST00000427448 529 ntBASIC17.26■□□□□ 0.35
P04436 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P04436 MCCD1P1-208ENST00000445732 328 ntBASIC17.26■□□□□ 0.35
P04436 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
P04436 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.26■□□□□ 0.35
P04436 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.26■□□□□ 0.35
P04436 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
P04436 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 AL032819.2-201ENST00000624543 2162 ntBASIC17.26■□□□□ 0.35
P04436 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.26■□□□□ 0.35
P04436 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
P04436 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.26■□□□□ 0.35
P04436 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P04436 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04436 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.25■□□□□ 0.35
P04436 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.25■□□□□ 0.35
P04436 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P04436 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
P04436 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P04436 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 AC092647.4-201ENST00000457211 535 ntBASIC17.25■□□□□ 0.35
P04436 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.25■□□□□ 0.35
P04436 YBX1P2-201ENST00000489612 999 ntBASIC17.25■□□□□ 0.35
P04436 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.25■□□□□ 0.35
P04436 FP475955.4-201ENST00000623131 1990 ntBASIC17.25■□□□□ 0.35
P04436 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 IRX1P1-201ENST00000438849 1838 ntBASIC17.25■□□□□ 0.35
P04436 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 AC120498.9-201ENST00000339021 3867 ntBASIC17.25■□□□□ 0.35
P04436 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.25■□□□□ 0.35
P04436 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04436 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
P04436 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.24■□□□□ 0.35
P04436 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P04436 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P04436 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
P04436 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
P04436 GPAT2P1-201ENST00000444924 1672 ntBASIC17.24■□□□□ 0.35
P04436 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 ARMC10P1-201ENST00000313754 855 ntBASIC17.24■□□□□ 0.35
P04436 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.24■□□□□ 0.35
P04436 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P04436 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 AC009947.2-201ENST00000444014 672 ntBASIC17.24■□□□□ 0.35
P04436 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
P04436 MIR4674-201ENST00000582457 87 ntBASIC17.24■□□□□ 0.35
P04436 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 AC007952.6-201ENST00000573168 2673 ntBASIC17.24■□□□□ 0.35
P04436 AC003957.1-201ENST00000625108 2673 ntBASIC17.24■□□□□ 0.35
P04436 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04436 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.24■□□□□ 0.35
P04436 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms