Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT6BP04259 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT6BP04259 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KRT6BP04259 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT6BP04259 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 Z85996.1-201ENST00000494644 937 ntBASIC18.31■□□□□ 0.52
KRT6BP04259 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT6BP04259 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.31■□□□□ 0.52
KRT6BP04259 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 AC006058.3-201ENST00000606217 1069 ntBASIC18.31■□□□□ 0.52
KRT6BP04259 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT6BP04259 AC131212.4-201ENST00000623606 975 ntBASIC18.31■□□□□ 0.52
KRT6BP04259 AC073648.6-201ENST00000641589 218 ntBASIC18.31■□□□□ 0.52
KRT6BP04259 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT6BP04259 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
KRT6BP04259 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT6BP04259 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT6BP04259 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6BP04259 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6BP04259 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6BP04259 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6BP04259 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6BP04259 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6BP04259 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6BP04259 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6BP04259 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6BP04259 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT6BP04259 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6BP04259 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 WIZP1-201ENST00000531444 2299 ntBASIC18.3■□□□□ 0.52
KRT6BP04259 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT6BP04259 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6BP04259 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
KRT6BP04259 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT6BP04259 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT6BP04259 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 AP002982.1-201ENST00000492365 877 ntBASIC18.29■□□□□ 0.52
KRT6BP04259 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT6BP04259 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.29■□□□□ 0.52
KRT6BP04259 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6BP04259 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6BP04259 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT6BP04259 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
KRT6BP04259 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6BP04259 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6BP04259 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT6BP04259 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6BP04259 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6BP04259 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6BP04259 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6BP04259 NIFKP9-201ENST00000419265 221 ntBASIC18.28■□□□□ 0.52
KRT6BP04259 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms