Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IFNA1P01562 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.97□□□□□ -0.01
IFNA1P01562 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
IFNA1P01562 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
IFNA1P01562 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
IFNA1P01562 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.96□□□□□ -0.01
IFNA1P01562 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
IFNA1P01562 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.96□□□□□ -0.01
IFNA1P01562 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
IFNA1P01562 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
IFNA1P01562 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
IFNA1P01562 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
IFNA1P01562 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.96□□□□□ -0.01
IFNA1P01562 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 AC083906.6-201ENST00000641366 219 ntBASIC14.96□□□□□ -0.01
IFNA1P01562 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
IFNA1P01562 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.96□□□□□ -0.01
IFNA1P01562 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
IFNA1P01562 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IFNA1P01562 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.96□□□□□ -0.01
IFNA1P01562 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.96□□□□□ -0.02
IFNA1P01562 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.96□□□□□ -0.02
IFNA1P01562 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
IFNA1P01562 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IFNA1P01562 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
IFNA1P01562 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
IFNA1P01562 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.95□□□□□ -0.02
IFNA1P01562 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
IFNA1P01562 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
IFNA1P01562 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
IFNA1P01562 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.95□□□□□ -0.02
IFNA1P01562 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IFNA1P01562 AC126763.1-201ENST00000552015 2118 ntBASIC14.95□□□□□ -0.02
IFNA1P01562 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.95□□□□□ -0.02
IFNA1P01562 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
IFNA1P01562 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IFNA1P01562 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms