Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KDM4BO94953 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KDM4BO94953 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.59■□□□□ 0.25
KDM4BO94953 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.59■□□□□ 0.25
KDM4BO94953 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.59■□□□□ 0.25
KDM4BO94953 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.59■□□□□ 0.25
KDM4BO94953 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.59■□□□□ 0.25
KDM4BO94953 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.59■□□□□ 0.25
KDM4BO94953 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.59■□□□□ 0.25
KDM4BO94953 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.59■□□□□ 0.25
KDM4BO94953 MYC-209ENST00000641252 345 ntBASIC16.59■□□□□ 0.25
KDM4BO94953 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KDM4BO94953 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KDM4BO94953 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KDM4BO94953 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.59■□□□□ 0.25
KDM4BO94953 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KDM4BO94953 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
KDM4BO94953 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.58■□□□□ 0.25
KDM4BO94953 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KDM4BO94953 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.58■□□□□ 0.25
KDM4BO94953 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.58■□□□□ 0.24
KDM4BO94953 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KDM4BO94953 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.58■□□□□ 0.24
KDM4BO94953 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.58■□□□□ 0.24
KDM4BO94953 AC097658.1-201ENST00000475555 843 ntBASIC16.58■□□□□ 0.24
KDM4BO94953 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
KDM4BO94953 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.58■□□□□ 0.24
KDM4BO94953 AC006557.6-201ENST00000623071 864 ntBASIC16.58■□□□□ 0.24
KDM4BO94953 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KDM4BO94953 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.58■□□□□ 0.24
KDM4BO94953 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.58■□□□□ 0.24
KDM4BO94953 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.58■□□□□ 0.24
KDM4BO94953 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KDM4BO94953 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KDM4BO94953 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KDM4BO94953 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
KDM4BO94953 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KDM4BO94953 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
KDM4BO94953 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.57■□□□□ 0.24
KDM4BO94953 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.57■□□□□ 0.24
KDM4BO94953 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.57■□□□□ 0.24
KDM4BO94953 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.57■□□□□ 0.24
KDM4BO94953 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.57■□□□□ 0.24
KDM4BO94953 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.57■□□□□ 0.24
KDM4BO94953 HLA-B-256ENST00000639848 1089 ntBASIC16.57■□□□□ 0.24
KDM4BO94953 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KDM4BO94953 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KDM4BO94953 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.57■□□□□ 0.24
KDM4BO94953 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 ZNF815P-204ENST00000434898 1737 ntBASIC16.56■□□□□ 0.24
KDM4BO94953 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 AC093525.10-201ENST00000625130 1569 ntBASIC16.56■□□□□ 0.24
KDM4BO94953 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 AC079598.2-202ENST00000546624 1451 ntBASIC16.56■□□□□ 0.24
KDM4BO94953 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms