Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRCH4O75427 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRCH4O75427 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.67■□□□□ 0.74
LRCH4O75427 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.67■□□□□ 0.74
LRCH4O75427 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.67■□□□□ 0.74
LRCH4O75427 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 AC009113.1-201ENST00000570267 2443 ntBASIC19.67■□□□□ 0.74
LRCH4O75427 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.67■□□□□ 0.74
LRCH4O75427 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.67■□□□□ 0.74
LRCH4O75427 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.67■□□□□ 0.74
LRCH4O75427 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRCH4O75427 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRCH4O75427 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH4O75427 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.67■□□□□ 0.74
LRCH4O75427 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH4O75427 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH4O75427 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH4O75427 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH4O75427 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.66■□□□□ 0.74
LRCH4O75427 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.66■□□□□ 0.74
LRCH4O75427 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH4O75427 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.66■□□□□ 0.74
LRCH4O75427 AC026471.5-201ENST00000615068 467 ntBASIC19.66■□□□□ 0.74
LRCH4O75427 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRCH4O75427 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH4O75427 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.66■□□□□ 0.74
LRCH4O75427 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH4O75427 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LRCH4O75427 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.65■□□□□ 0.74
LRCH4O75427 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LRCH4O75427 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRCH4O75427 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.65■□□□□ 0.74
LRCH4O75427 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.65■□□□□ 0.74
LRCH4O75427 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.65■□□□□ 0.74
LRCH4O75427 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.65■□□□□ 0.74
LRCH4O75427 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.65■□□□□ 0.74
LRCH4O75427 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.65■□□□□ 0.74
LRCH4O75427 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRCH4O75427 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRCH4O75427 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRCH4O75427 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.65■□□□□ 0.74
LRCH4O75427 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.65■□□□□ 0.74
LRCH4O75427 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRCH4O75427 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH4O75427 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH4O75427 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.64■□□□□ 0.74
LRCH4O75427 NEFHP1-201ENST00000412845 2629 ntBASIC19.64■□□□□ 0.73
LRCH4O75427 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH4O75427 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH4O75427 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRCH4O75427 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH4O75427 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRCH4O75427 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.64■□□□□ 0.73
LRCH4O75427 MFAP1P1-201ENST00000442257 1255 ntBASIC19.64■□□□□ 0.73
LRCH4O75427 AL355355.2-201ENST00000442321 338 ntBASIC19.64■□□□□ 0.73
LRCH4O75427 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH4O75427 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.64■□□□□ 0.73
LRCH4O75427 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms