Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNOT3O75175 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT3O75175 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNOT3O75175 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT3O75175 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT3O75175 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.3■□□□□ 0.52
CNOT3O75175 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT3O75175 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.3■□□□□ 0.52
CNOT3O75175 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.3■□□□□ 0.52
CNOT3O75175 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CNOT3O75175 AC131212.4-201ENST00000623606 975 ntBASIC18.3■□□□□ 0.52
CNOT3O75175 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CNOT3O75175 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT3O75175 KRT8P8-201ENST00000434750 1448 ntBASIC18.3■□□□□ 0.52
CNOT3O75175 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.3■□□□□ 0.52
CNOT3O75175 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNOT3O75175 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT3O75175 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.29■□□□□ 0.52
CNOT3O75175 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNOT3O75175 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT3O75175 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.29■□□□□ 0.52
CNOT3O75175 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT3O75175 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT3O75175 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT3O75175 RCC2P6-201ENST00000526625 1557 ntBASIC18.29■□□□□ 0.52
CNOT3O75175 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT3O75175 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT3O75175 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CNOT3O75175 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 AC007613.1-201ENST00000572811 2597 ntBASIC18.28■□□□□ 0.52
CNOT3O75175 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CNOT3O75175 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT3O75175 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 AC130371.2-201ENST00000619443 611 ntBASIC18.28■□□□□ 0.52
CNOT3O75175 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CNOT3O75175 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CNOT3O75175 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 LINC01568-207ENST00000641790 1380 ntBASIC18.28■□□□□ 0.52
CNOT3O75175 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 BCL2-203ENST00000589955 5011 ntBASIC18.28■□□□□ 0.52
CNOT3O75175 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT3O75175 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CNOT3O75175 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT3O75175 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CNOT3O75175 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 AC009237.14-201ENST00000609975 1594 ntBASIC18.27■□□□□ 0.52
CNOT3O75175 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CNOT3O75175 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT3O75175 MIR1224-201ENST00000408193 85 ntBASIC18.27■□□□□ 0.52
CNOT3O75175 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CNOT3O75175 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.27■□□□□ 0.52
CNOT3O75175 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT3O75175 Z85996.1-201ENST00000494644 937 ntBASIC18.27■□□□□ 0.52
CNOT3O75175 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms