Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PFDN1O60925 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.95■□□□□ 0.3
PFDN1O60925 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PFDN1O60925 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PFDN1O60925 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.95■□□□□ 0.3
PFDN1O60925 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PFDN1O60925 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.95■□□□□ 0.3
PFDN1O60925 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.95■□□□□ 0.3
PFDN1O60925 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.94■□□□□ 0.3
PFDN1O60925 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.94■□□□□ 0.3
PFDN1O60925 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 MIR6765-201ENST00000614092 87 ntBASIC16.94■□□□□ 0.3
PFDN1O60925 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PFDN1O60925 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PFDN1O60925 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PFDN1O60925 AC005052.1-201ENST00000625181 2492 ntBASIC16.94■□□□□ 0.3
PFDN1O60925 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PFDN1O60925 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
PFDN1O60925 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.93■□□□□ 0.3
PFDN1O60925 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
PFDN1O60925 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PFDN1O60925 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 BX005040.4-201ENST00000637145 1518 ntBASIC16.93■□□□□ 0.3
PFDN1O60925 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PFDN1O60925 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.93■□□□□ 0.3
PFDN1O60925 AC022616.5-201ENST00000518796 181 ntBASIC16.93■□□□□ 0.3
PFDN1O60925 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PFDN1O60925 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.93■□□□□ 0.3
PFDN1O60925 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.93■□□□□ 0.3
PFDN1O60925 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.93■□□□□ 0.3
PFDN1O60925 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PFDN1O60925 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PFDN1O60925 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms