Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 HMGA1P5-201ENST00000412453 271 ntBASIC19.17■□□□□ 0.66
PRAMEF11O60813 MCCD1P1-208ENST00000445732 328 ntBASIC19.17■□□□□ 0.66
PRAMEF11O60813 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 AL109659.2-201ENST00000606809 1674 ntBASIC19.17■□□□□ 0.66
PRAMEF11O60813 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 ECEL1P3-201ENST00000427961 737 ntBASIC19.16■□□□□ 0.66
PRAMEF11O60813 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
PRAMEF11O60813 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF11O60813 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 SLC25A3P1-201ENST00000443844 931 ntBASIC19.15■□□□□ 0.66
PRAMEF11O60813 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF11O60813 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF11O60813 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRAMEF11O60813 AC098818.2-201ENST00000564925 2320 ntBASIC19.14■□□□□ 0.66
PRAMEF11O60813 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRAMEF11O60813 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PRAMEF11O60813 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.14■□□□□ 0.66
PRAMEF11O60813 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.14■□□□□ 0.65
PRAMEF11O60813 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF11O60813 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF11O60813 AC008556.1-201ENST00000610908 2040 ntBASIC19.13■□□□□ 0.65
PRAMEF11O60813 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.13■□□□□ 0.65
PRAMEF11O60813 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF11O60813 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF11O60813 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF11O60813 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF11O60813 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF11O60813 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PRAMEF11O60813 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF11O60813 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.13■□□□□ 0.65
PRAMEF11O60813 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF11O60813 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms