Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
FOXD2O60548 AL645929.1-201ENST00000420084 975 ntBASIC19■□□□□ 0.63
FOXD2O60548 AP000347.1-202ENST00000435868 847 ntBASIC19■□□□□ 0.63
FOXD2O60548 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19■□□□□ 0.63
FOXD2O60548 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19■□□□□ 0.63
FOXD2O60548 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
FOXD2O60548 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19■□□□□ 0.63
FOXD2O60548 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19■□□□□ 0.63
FOXD2O60548 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19■□□□□ 0.63
FOXD2O60548 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19■□□□□ 0.63
FOXD2O60548 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
FOXD2O60548 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
FOXD2O60548 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19■□□□□ 0.63
FOXD2O60548 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19■□□□□ 0.63
FOXD2O60548 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXD2O60548 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
FOXD2O60548 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
FOXD2O60548 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.99■□□□□ 0.63
FOXD2O60548 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 AL022342.1-201ENST00000400363 863 ntBASIC18.99■□□□□ 0.63
FOXD2O60548 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXD2O60548 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXD2O60548 TSSC2-201ENST00000450217 709 ntBASIC18.99■□□□□ 0.63
FOXD2O60548 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.99■□□□□ 0.63
FOXD2O60548 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.99■□□□□ 0.63
FOXD2O60548 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.99■□□□□ 0.63
FOXD2O60548 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.99■□□□□ 0.63
FOXD2O60548 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
FOXD2O60548 AC117500.6-201ENST00000624871 588 ntBASIC18.99■□□□□ 0.63
FOXD2O60548 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXD2O60548 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 AP000974.1-201ENST00000623909 2387 ntBASIC18.99■□□□□ 0.63
FOXD2O60548 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXD2O60548 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
FOXD2O60548 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
FOXD2O60548 BX276092.5-203ENST00000456199 560 ntBASIC18.98■□□□□ 0.63
FOXD2O60548 AC034232.1-201ENST00000506026 1064 ntBASIC18.98■□□□□ 0.63
FOXD2O60548 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.98■□□□□ 0.63
FOXD2O60548 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXD2O60548 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
FOXD2O60548 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXD2O60548 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXD2O60548 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
FOXD2O60548 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXD2O60548 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FOXD2O60548 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXD2O60548 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
FOXD2O60548 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXD2O60548 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXD2O60548 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 AL160286.2-201ENST00000567150 934 ntBASIC18.97■□□□□ 0.63
FOXD2O60548 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXD2O60548 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 NEFHP1-201ENST00000412845 2629 ntBASIC18.97■□□□□ 0.63
FOXD2O60548 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXD2O60548 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXD2O60548 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXD2O60548 BX323043.1-201ENST00000641006 1765 ntBASIC18.96■□□□□ 0.63
FOXD2O60548 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXD2O60548 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXD2O60548 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXD2O60548 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXD2O60548 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms