Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC008622.2-201ENST00000617006 1229 ntBASIC17.58■□□□□ 0.4
PRKNO60260 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.58■□□□□ 0.4
PRKNO60260 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.58■□□□□ 0.4
PRKNO60260 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
PRKNO60260 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRKNO60260 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRKNO60260 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRKNO60260 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.58■□□□□ 0.4
PRKNO60260 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRKNO60260 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PRKNO60260 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.57■□□□□ 0.4
PRKNO60260 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 AP000974.1-201ENST00000623909 2387 ntBASIC17.57■□□□□ 0.4
PRKNO60260 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 AL137013.1-201ENST00000432946 1228 ntBASIC17.57■□□□□ 0.4
PRKNO60260 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
PRKNO60260 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 FEM1AP3-201ENST00000403722 1741 ntBASIC17.57■□□□□ 0.4
PRKNO60260 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRKNO60260 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
PRKNO60260 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PRKNO60260 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.56■□□□□ 0.4
PRKNO60260 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PRKNO60260 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.56■□□□□ 0.4
PRKNO60260 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PRKNO60260 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.56■□□□□ 0.4
PRKNO60260 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 MIR4674-201ENST00000582457 87 ntBASIC17.56■□□□□ 0.4
PRKNO60260 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 AC010653.2-201ENST00000623505 997 ntBASIC17.56■□□□□ 0.4
PRKNO60260 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 AC098818.2-201ENST00000564925 2320 ntBASIC17.56■□□□□ 0.4
PRKNO60260 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.56■□□□□ 0.4
PRKNO60260 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRKNO60260 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
PRKNO60260 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.55■□□□□ 0.4
PRKNO60260 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.55■□□□□ 0.4
PRKNO60260 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.55■□□□□ 0.4
PRKNO60260 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.55■□□□□ 0.4
PRKNO60260 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 HMGA1P5-201ENST00000412453 271 ntBASIC17.55■□□□□ 0.4
PRKNO60260 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.55■□□□□ 0.4
PRKNO60260 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRKNO60260 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PRKNO60260 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRKNO60260 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms