Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 AC012313.1-201ENST00000593393 3059 ntBASIC15.42■□□□□ 0.06
SSSCA1O60232 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SSSCA1O60232 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSSCA1O60232 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.42■□□□□ 0.06
SSSCA1O60232 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.42■□□□□ 0.06
SSSCA1O60232 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.42■□□□□ 0.06
SSSCA1O60232 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SSSCA1O60232 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.42■□□□□ 0.06
SSSCA1O60232 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.41■□□□□ 0.06
SSSCA1O60232 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SSSCA1O60232 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.41■□□□□ 0.06
SSSCA1O60232 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SSSCA1O60232 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SSSCA1O60232 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.41■□□□□ 0.06
SSSCA1O60232 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.41■□□□□ 0.06
SSSCA1O60232 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.41■□□□□ 0.06
SSSCA1O60232 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.41■□□□□ 0.06
SSSCA1O60232 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.41■□□□□ 0.06
SSSCA1O60232 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.41■□□□□ 0.06
SSSCA1O60232 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSSCA1O60232 AC073592.3-201ENST00000625118 1834 ntBASIC15.4■□□□□ 0.06
SSSCA1O60232 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.4■□□□□ 0.06
SSSCA1O60232 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SSSCA1O60232 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
SSSCA1O60232 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 CNN2P6-201ENST00000439038 900 ntBASIC15.4■□□□□ 0.06
SSSCA1O60232 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.4■□□□□ 0.06
SSSCA1O60232 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.4■□□□□ 0.06
SSSCA1O60232 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.4■□□□□ 0.06
SSSCA1O60232 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SSSCA1O60232 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SSSCA1O60232 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.4■□□□□ 0.06
SSSCA1O60232 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSSCA1O60232 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSSCA1O60232 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SSSCA1O60232 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms