Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 AL109659.2-201ENST00000606809 1674 ntBASIC18.13■□□□□ 0.49
PRICKLE3O43900 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 TERF1P1-201ENST00000311003 1181 ntBASIC18.13■□□□□ 0.49
PRICKLE3O43900 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 AC005521.1-201ENST00000393351 872 ntBASIC18.13■□□□□ 0.49
PRICKLE3O43900 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 KRT8P45-201ENST00000414328 1447 ntBASIC18.13■□□□□ 0.49
PRICKLE3O43900 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRICKLE3O43900 RCC2P3-201ENST00000418112 1537 ntBASIC18.13■□□□□ 0.49
PRICKLE3O43900 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.13■□□□□ 0.49
PRICKLE3O43900 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 AC006333.2-201ENST00000607957 2099 ntBASIC18.12■□□□□ 0.49
PRICKLE3O43900 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 RCN1P1-201ENST00000400413 996 ntBASIC18.12■□□□□ 0.49
PRICKLE3O43900 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 WWOX-216ENST00000569818 525 ntBASIC18.12■□□□□ 0.49
PRICKLE3O43900 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.12■□□□□ 0.49
PRICKLE3O43900 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE3O43900 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 CR769767.2-201ENST00000622735 460 ntBASIC18.11■□□□□ 0.49
PRICKLE3O43900 AC083906.6-201ENST00000641366 219 ntBASIC18.11■□□□□ 0.49
PRICKLE3O43900 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.11■□□□□ 0.49
PRICKLE3O43900 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE3O43900 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms