Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SMAD6O43541 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMAD6O43541 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
SMAD6O43541 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.09■□□□□ 0.65
SMAD6O43541 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 AC008556.1-201ENST00000610908 2040 ntBASIC19.09■□□□□ 0.65
SMAD6O43541 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.09■□□□□ 0.65
SMAD6O43541 KRT18P35-201ENST00000510488 1269 ntBASIC19.09■□□□□ 0.65
SMAD6O43541 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.09■□□□□ 0.65
SMAD6O43541 AL441883.1-201ENST00000566170 1045 ntBASIC19.09■□□□□ 0.65
SMAD6O43541 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD6O43541 KRT8P32-201ENST00000512863 1461 ntBASIC19.09■□□□□ 0.65
SMAD6O43541 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.08■□□□□ 0.64
SMAD6O43541 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.08■□□□□ 0.64
SMAD6O43541 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 RNF152P1-201ENST00000397754 604 ntBASIC19.08■□□□□ 0.64
SMAD6O43541 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.08■□□□□ 0.64
SMAD6O43541 TSPY5P-201ENST00000426936 936 ntBASIC19.08■□□□□ 0.64
SMAD6O43541 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.08■□□□□ 0.64
SMAD6O43541 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.08■□□□□ 0.64
SMAD6O43541 NTF6B-201ENST00000591913 560 ntBASIC19.08■□□□□ 0.64
SMAD6O43541 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMAD6O43541 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD6O43541 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.08■□□□□ 0.64
SMAD6O43541 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SMAD6O43541 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.07■□□□□ 0.64
SMAD6O43541 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SMAD6O43541 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
SMAD6O43541 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.07■□□□□ 0.64
SMAD6O43541 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.07■□□□□ 0.64
SMAD6O43541 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.07■□□□□ 0.64
SMAD6O43541 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.07■□□□□ 0.64
SMAD6O43541 AC063952.2-201ENST00000498792 1227 ntBASIC19.07■□□□□ 0.64
SMAD6O43541 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SMAD6O43541 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.07■□□□□ 0.64
SMAD6O43541 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.07■□□□□ 0.64
SMAD6O43541 MIR3180-5-201ENST00000583743 153 ntBASIC19.07■□□□□ 0.64
SMAD6O43541 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SMAD6O43541 AC140113.3-201ENST00000605663 199 ntBASIC19.07■□□□□ 0.64
SMAD6O43541 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 AL590326.2-201ENST00000625139 305 ntBASIC19.07■□□□□ 0.64
SMAD6O43541 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.07■□□□□ 0.64
SMAD6O43541 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SMAD6O43541 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.07■□□□□ 0.64
SMAD6O43541 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SMAD6O43541 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD6O43541 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.06■□□□□ 0.64
SMAD6O43541 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.06■□□□□ 0.64
SMAD6O43541 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.06■□□□□ 0.64
SMAD6O43541 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.06■□□□□ 0.64
SMAD6O43541 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.06■□□□□ 0.64
SMAD6O43541 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.06■□□□□ 0.64
SMAD6O43541 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 AL109659.2-201ENST00000606809 1674 ntBASIC19.06■□□□□ 0.64
SMAD6O43541 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SMAD6O43541 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD6O43541 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms