Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SPTLC1O15269 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTLC1O15269 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTLC1O15269 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.22■□□□□ 0.83
SPTLC1O15269 AC091076.1-201ENST00000610741 619 ntBASIC20.22■□□□□ 0.83
SPTLC1O15269 AL023973.1-201ENST00000624619 620 ntBASIC20.22■□□□□ 0.83
SPTLC1O15269 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTLC1O15269 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC1O15269 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC1O15269 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SPTLC1O15269 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC1O15269 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTLC1O15269 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTLC1O15269 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC1O15269 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC1O15269 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTLC1O15269 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC1O15269 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC1O15269 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SPTLC1O15269 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPTLC1O15269 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.21■□□□□ 0.83
SPTLC1O15269 AL441883.1-201ENST00000566170 1045 ntBASIC20.21■□□□□ 0.83
SPTLC1O15269 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 AL512604.3-201ENST00000569583 964 ntBASIC20.21■□□□□ 0.83
SPTLC1O15269 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTLC1O15269 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SPTLC1O15269 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTLC1O15269 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SPTLC1O15269 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC1O15269 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.2■□□□□ 0.83
SPTLC1O15269 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC1O15269 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPTLC1O15269 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC1O15269 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC1O15269 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC1O15269 UPK3BP1-201ENST00000428678 509 ntBASIC20.2■□□□□ 0.82
SPTLC1O15269 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC1O15269 AC063952.2-201ENST00000498792 1227 ntBASIC20.2■□□□□ 0.82
SPTLC1O15269 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.2■□□□□ 0.82
SPTLC1O15269 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.2■□□□□ 0.82
SPTLC1O15269 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 AL512353.2-201ENST00000448759 1962 ntBASIC20.2■□□□□ 0.82
SPTLC1O15269 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC1O15269 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC1O15269 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC1O15269 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC1O15269 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.19■□□□□ 0.82
SPTLC1O15269 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.19■□□□□ 0.82
SPTLC1O15269 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SPTLC1O15269 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 RNF152P1-201ENST00000397754 604 ntBASIC20.19■□□□□ 0.82
SPTLC1O15269 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTLC1O15269 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.19■□□□□ 0.82
SPTLC1O15269 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.19■□□□□ 0.82
SPTLC1O15269 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.19■□□□□ 0.82
SPTLC1O15269 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTLC1O15269 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC1O15269 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTLC1O15269 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.18■□□□□ 0.82
SPTLC1O15269 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.18■□□□□ 0.82
SPTLC1O15269 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SPTLC1O15269 AL049812.1-201ENST00000432563 2267 ntBASIC20.18■□□□□ 0.82
SPTLC1O15269 AC036111.1-201ENST00000533973 1582 ntBASIC20.18■□□□□ 0.82
SPTLC1O15269 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 TSPY5P-201ENST00000426936 936 ntBASIC20.18■□□□□ 0.82
SPTLC1O15269 TPM4P1-201ENST00000436100 807 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms