Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4M1O00189 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4M1O00189 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4M1O00189 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4M1O00189 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4M1O00189 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP4M1O00189 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4M1O00189 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.58■□□□□ 0.09
AP4M1O00189 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4M1O00189 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4M1O00189 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
AP4M1O00189 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4M1O00189 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4M1O00189 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4M1O00189 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4M1O00189 HTR7P1-202ENST00000624664 4411 ntBASIC15.58■□□□□ 0.09
AP4M1O00189 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP4M1O00189 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4M1O00189 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
AP4M1O00189 AC068880.1-201ENST00000507289 2297 ntBASIC15.58■□□□□ 0.08
AP4M1O00189 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
AP4M1O00189 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4M1O00189 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4M1O00189 AC124016.1-201ENST00000609552 612 ntBASIC15.58■□□□□ 0.08
AP4M1O00189 AC110285.5-201ENST00000611501 352 ntBASIC15.58■□□□□ 0.08
AP4M1O00189 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP4M1O00189 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
AP4M1O00189 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
AP4M1O00189 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4M1O00189 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP4M1O00189 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 AC018553.1-201ENST00000616682 1458 ntBASIC15.58■□□□□ 0.08
AP4M1O00189 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4M1O00189 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.57■□□□□ 0.08
AP4M1O00189 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 AC004264.1-201ENST00000608354 794 ntBASIC15.57■□□□□ 0.08
AP4M1O00189 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 NBPF21P-201ENST00000425093 1451 ntBASIC15.57■□□□□ 0.08
AP4M1O00189 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4M1O00189 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP4M1O00189 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4M1O00189 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4M1O00189 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP4M1O00189 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4M1O00189 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
AP4M1O00189 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4M1O00189 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 AC124067.4-201ENST00000519691 2379 ntBASIC15.56■□□□□ 0.08
AP4M1O00189 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.56■□□□□ 0.08
AP4M1O00189 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP4M1O00189 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
AP4M1O00189 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4M1O00189 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms