Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DDX39AO00148 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX39AO00148 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX39AO00148 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DDX39AO00148 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
DDX39AO00148 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX39AO00148 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX39AO00148 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX39AO00148 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX39AO00148 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX39AO00148 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX39AO00148 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX39AO00148 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 AC005332.7-201ENST00000614046 2005 ntBASIC21.25■□□□□ 0.99
DDX39AO00148 CR769767.2-201ENST00000622735 460 ntBASIC21.25■□□□□ 0.99
DDX39AO00148 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DDX39AO00148 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX39AO00148 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX39AO00148 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX39AO00148 FP475955.4-201ENST00000623131 1990 ntBASIC21.25■□□□□ 0.99
DDX39AO00148 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
DDX39AO00148 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX39AO00148 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 AC036111.1-201ENST00000533973 1582 ntBASIC21.24■□□□□ 0.99
DDX39AO00148 KRT8P3-201ENST00000519669 1449 ntBASIC21.24■□□□□ 0.99
DDX39AO00148 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 NTF6B-201ENST00000591913 560 ntBASIC21.24■□□□□ 0.99
DDX39AO00148 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX39AO00148 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.24■□□□□ 0.99
DDX39AO00148 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX39AO00148 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX39AO00148 AL049812.1-201ENST00000432563 2267 ntBASIC21.24■□□□□ 0.99
DDX39AO00148 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
DDX39AO00148 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX39AO00148 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX39AO00148 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX39AO00148 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
DDX39AO00148 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 ARMC10P1-201ENST00000313754 855 ntBASIC21.23■□□□□ 0.99
DDX39AO00148 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.23■□□□□ 0.99
DDX39AO00148 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX39AO00148 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX39AO00148 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX39AO00148 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX39AO00148 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 AL512604.3-201ENST00000569583 964 ntBASIC21.23■□□□□ 0.99
DDX39AO00148 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX39AO00148 AC011558.1-201ENST00000623459 338 ntBASIC21.23■□□□□ 0.99
DDX39AO00148 AL590326.2-201ENST00000625139 305 ntBASIC21.23■□□□□ 0.99
DDX39AO00148 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDX39AO00148 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX39AO00148 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX39AO00148 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
DDX39AO00148 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms