Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 NCF1B-203ENST00000435988 1254 ntBASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 AC098934.4-201ENST00000564127 592 ntBASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 ABALON-201ENST00000629058 1903 ntBASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 AC068880.1-201ENST00000507289 2297 ntBASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 AC073592.3-201ENST00000625118 1834 ntBASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM49D1C9J1S8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 AL160286.2-201ENST00000567150 934 ntBASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM49D1C9J1S8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 HLA-A-209ENST00000638375 975 ntBASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM49D1C9J1S8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms