Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AL035633.1-201ENST00000406139 838 ntBASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 MINOS1P3-201ENST00000457048 203 ntBASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 CYMP-203ENST00000474680 1263 ntBASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AC008608.2-201ENST00000606089 416 ntBASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 AL355877.3-201ENST00000622820 899 ntBASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1QTNF9BB2RNN3 KRT18P28-201ENST00000453838 1332 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 AL137060.1-201ENST00000618151 2648 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 FAM8A3P-201ENST00000427218 844 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 DNAJB3-201ENST00000446806 729 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 VENTXP7-201ENST00000475503 772 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 AC091607.1-201ENST00000490318 1060 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 PKD1P6-201ENST00000343738 4769 ntBASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1QTNF9BB2RNN3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 FP700111.2-201ENST00000619190 1892 ntBASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 AC145285.3-201ENST00000564603 959 ntBASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 AL591684.3-201ENST00000605187 298 ntBASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C1QTNF9BB2RNN3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms