Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 RPS2P28-201ENST00000314255 741 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC009533.2-201ENST00000543664 586 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC138761.1-201ENST00000584393 385 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC063926.2-201ENST00000623766 1308 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AL023284.2-201ENST00000405850 579 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 FGFR3P6-201ENST00000457012 610 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 FP700111.2-201ENST00000619190 1892 ntBASIC14.65□□□□□ -0.06
COL6A5A8TX70 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
COL6A5A8TX70 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A5A8TX70 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.65□□□□□ -0.07
COL6A5A8TX70 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 PAWRP1-201ENST00000451083 565 ntBASIC14.64□□□□□ -0.07
COL6A5A8TX70 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 GUSBP12-201ENST00000513727 720 ntBASIC14.64□□□□□ -0.07
COL6A5A8TX70 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 AP002472.1-201ENST00000577490 586 ntBASIC14.64□□□□□ -0.07
COL6A5A8TX70 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 AC005225.4-201ENST00000557330 545 ntBASIC14.64□□□□□ -0.07
COL6A5A8TX70 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.64□□□□□ -0.07
COL6A5A8TX70 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL6A5A8TX70 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL6A5A8TX70 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 AC121338.2-201ENST00000622535 1744 ntBASIC14.63□□□□□ -0.07
COL6A5A8TX70 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL6A5A8TX70 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL6A5A8TX70 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 AC008735.5-201ENST00000623544 497 ntBASIC14.63□□□□□ -0.07
COL6A5A8TX70 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.63□□□□□ -0.07
COL6A5A8TX70 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.63□□□□□ -0.07
COL6A5A8TX70 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL6A5A8TX70 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL6A5A8TX70 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL6A5A8TX70 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL6A5A8TX70 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
COL6A5A8TX70 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL6A5A8TX70 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL6A5A8TX70 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.62□□□□□ -0.07
COL6A5A8TX70 RN7SL606P-201ENST00000472779 293 ntBASIC14.62□□□□□ -0.07
COL6A5A8TX70 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL6A5A8TX70 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.62□□□□□ -0.07
COL6A5A8TX70 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.62□□□□□ -0.07
COL6A5A8TX70 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.62□□□□□ -0.07
COL6A5A8TX70 AC093028.1-201ENST00000622998 982 ntBASIC14.62□□□□□ -0.07
COL6A5A8TX70 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms