Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTL1A6NKG5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 CHCHD2P8-201ENST00000429873 447 ntBASIC25.08■■□□□ 1.61
RTL1A6NKG5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTL1A6NKG5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL1A6NKG5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL1A6NKG5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTL1A6NKG5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
RTL1A6NKG5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTL1A6NKG5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTL1A6NKG5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RTL1A6NKG5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTL1A6NKG5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RTL1A6NKG5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTL1A6NKG5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
RTL1A6NKG5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL1A6NKG5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL1A6NKG5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTL1A6NKG5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 AC092329.2-201ENST00000598402 547 ntBASIC25.07■■□□□ 1.6
RTL1A6NKG5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL1A6NKG5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTL1A6NKG5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.07■■□□□ 1.6
RTL1A6NKG5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL1A6NKG5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL1A6NKG5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTL1A6NKG5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL1A6NKG5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 TPM4P1-201ENST00000436100 807 ntBASIC25.06■■□□□ 1.6
RTL1A6NKG5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTL1A6NKG5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 MIR3652-201ENST00000579335 131 ntBASIC25.06■■□□□ 1.6
RTL1A6NKG5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC25.06■■□□□ 1.6
RTL1A6NKG5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL1A6NKG5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 PRELID1P1-202ENST00000567272 903 ntBASIC25.05■■□□□ 1.6
RTL1A6NKG5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 AP002414.4-201ENST00000589764 1148 ntBASIC25.05■■□□□ 1.6
RTL1A6NKG5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 FEM1AP3-201ENST00000403722 1741 ntBASIC25.05■■□□□ 1.6
RTL1A6NKG5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL1A6NKG5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.05■■□□□ 1.6
RTL1A6NKG5 IRX1P1-201ENST00000438849 1838 ntBASIC25.04■■□□□ 1.6
RTL1A6NKG5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 UBQLN4P1-201ENST00000461599 1801 ntBASIC25.04■■□□□ 1.6
RTL1A6NKG5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RTL1A6NKG5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.04■■□□□ 1.6
RTL1A6NKG5 MIR3180-4-201ENST00000582223 153 ntBASIC25.04■■□□□ 1.6
RTL1A6NKG5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms