Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L3A6NE82 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.62■□□□□ 0.25
MBD3L3A6NE82 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 AC092597.1-201ENST00000487352 616 ntBASIC16.61■□□□□ 0.25
MBD3L3A6NE82 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 MIR3917-201ENST00000580971 93 ntBASIC16.61■□□□□ 0.25
MBD3L3A6NE82 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L3A6NE82 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 MIR564-202ENST00000385049 94 ntBASIC16.6■□□□□ 0.25
MBD3L3A6NE82 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 AL645929.1-201ENST00000420084 975 ntBASIC16.6■□□□□ 0.25
MBD3L3A6NE82 KRT18P23-201ENST00000435622 1283 ntBASIC16.6■□□□□ 0.25
MBD3L3A6NE82 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L3A6NE82 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 AC093458.2-201ENST00000623150 629 ntBASIC16.59■□□□□ 0.25
MBD3L3A6NE82 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L3A6NE82 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.58■□□□□ 0.25
MBD3L3A6NE82 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L3A6NE82 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms