Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV5S1A1TA0A578 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 AL109659.2-201ENST00000606809 1674 ntBASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 NEFHP1-201ENST00000412845 2629 ntBASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 SNORA78-201ENST00000459373 127 ntBASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV5S1A1TA0A578 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 AL023284.2-201ENST00000405850 579 ntBASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 CRYGFP-201ENST00000418459 633 ntBASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 MIR4674-201ENST00000582457 87 ntBASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 MIR4785-201ENST00000585005 73 ntBASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 GPAT2P1-201ENST00000444924 1672 ntBASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.71■□□□□ 0.75
TCRBV5S1A1TA0A578 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 AC090164.3-201ENST00000610780 2143 ntBASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 AC008556.1-201ENST00000610908 2040 ntBASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.7■□□□□ 0.74
TCRBV5S1A1TA0A578 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms