Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 IGHV3-47-201ENST00000425060 335 ntBASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC163A0A0D9SF12 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 MRPL3P1-201ENST00000400109 1033 ntBASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 AC079776.4-201ENST00000511039 504 ntBASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 AC138894.3-201ENST00000603787 634 ntBASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC163A0A0D9SF12 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 SAPCD2P3-201ENST00000455031 850 ntBASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 GPR32P1-201ENST00000601788 811 ntBASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 AC099336.1-202ENST00000602961 463 ntBASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC163A0A0D9SF12 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 AC073314.1-201ENST00000568729 2216 ntBASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 PMS2P1-201ENST00000431037 1228 ntBASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 GUSBP12-201ENST00000513727 720 ntBASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 REXO1L6P-202ENST00000619970 1078 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms