Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 ABALON-201ENST00000629058 1903 ntBASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 AL162430.1-201ENST00000480705 870 ntBASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 AC022517.1-201ENST00000592429 346 ntBASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 AC080038.1-201ENST00000611274 1154 ntBASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 AL121906.2-201ENST00000621597 723 ntBASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV5A0A0B4J249 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 AP000997.3-201ENST00000623333 2250 ntBASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 MIPEPP3-201ENST00000412105 444 ntBASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 TUBB8P6-201ENST00000436895 1288 ntBASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 KRT18P16-201ENST00000510337 1294 ntBASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 RAP2CP1-201ENST00000605103 478 ntBASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV5A0A0B4J249 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms