Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC069544.1-201ENST00000609399 999 ntBASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC067852.2-201ENST00000590513 2313 ntBASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 KRT8P3-201ENST00000519669 1449 ntBASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-3A0A0A0MS03 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC233263.1-201ENST00000578059 224 ntBASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV5-3A0A0A0MS03 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.71■□□□□ 0.42
TRBV5-3A0A0A0MS03 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV5-3A0A0A0MS03 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.71■□□□□ 0.42
TRBV5-3A0A0A0MS03 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 KRT8P45-201ENST00000414328 1447 ntBASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-3A0A0A0MS03 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms