Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC009831.4-201ENST00000620744 325 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 SNORA1B-201ENST00000362535 133 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 SNORA9-201ENST00000384215 133 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 RNU6-851P-201ENST00000384565 107 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 RNU2-63P-201ENST00000410792 194 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 SNORA74D-201ENST00000516404 141 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 AL035470.1-201ENST00000622571 220 ntBASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
AP4E1Q9UPM8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.242-201ENST00000364473 110 ntBASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.328-201ENST00000365208 113 ntBASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 RNU6-220P-201ENST00000390919 107 ntBASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 AC003685.2-201ENST00000422795 395 ntBASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 FTH1P12-201ENST00000432137 551 ntBASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 AC106754.2-201ENST00000623006 233 ntBASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.97□□□□□ -1.93
AP4E1Q9UPM8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 RNU6-766P-201ENST00000362478 107 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 RNU6-640P-201ENST00000363693 105 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.163-201ENST00000363702 113 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.348-201ENST00000365403 103 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 RNU6-905P-201ENST00000384434 107 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 RPS26P48-201ENST00000491713 339 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 AC007536.1-201ENST00000533382 349 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 AL355297.2-201ENST00000604792 129 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.96□□□□□ -1.94
AP4E1Q9UPM8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 SNORD114-6-201ENST00000364393 72 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 U8.9-201ENST00000365667 134 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 MIR548O-201ENST00000408583 114 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 RN7SKP284-201ENST00000411002 343 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 SRIP3-201ENST00000413200 219 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 AL139132.1-201ENST00000431587 344 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 S100A11P2-201ENST00000467589 312 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 RNU6-240P-201ENST00000516098 97 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 RNU1-142P-201ENST00000516682 145 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 AP002004.2-201ENST00000531656 154 ntBASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP4E1Q9UPM8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 SNORA44-201ENST00000384584 132 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 MIR561-201ENST00000385216 97 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 AC104332.2-201ENST00000429959 156 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 SNRPGP14-201ENST00000435400 219 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 RNU1-131P-201ENST00000458943 161 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 SCARNA13-201ENST00000516672 275 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.714-201ENST00000517065 90 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 MIR4762-201ENST00000585261 75 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 AC022217.4-201ENST00000604389 163 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 AC006441.5-201ENST00000612680 209 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 AL355596.1-201ENST00000565399 3996 ntBASIC2.94□□□□□ -1.94
AP4E1Q9UPM8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 U8.5-201ENST00000364528 136 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 SNORA25B-201ENST00000365507 128 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 SNORA26.7-201ENST00000391288 122 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 RN7SL636P-201ENST00000497504 294 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 RNU7-25P-201ENST00000516544 62 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.93□□□□□ -1.94
AP4E1Q9UPM8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.410-201ENST00000383992 113 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 RNU6-756P-201ENST00000383997 107 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 SNORA8-201ENST00000384574 139 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 MIR515-2-201ENST00000384883 83 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 MIR515-1-201ENST00000384884 83 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms