RNA–Protein interactions for RNA: ENST00000390476.1

TRDJ3-201, Transcript of T cell receptor delta joining 3, humanhuman

APPRIS P1 BASIC

Gene TRDJ3, Length 59 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDJ3-201ENST00000390476 CHIC1Q5VXU3 224 aa7.31□□□□□ -1.24
TRDJ3-201ENST00000390476 AEBP2Q6ZN18 517 aaPredicted RBP7.12□□□□□ -1.27
TRDJ3-201ENST00000390476 PHF23Q9BUL5 403 aaPredicted RBP6.53□□□□□ -1.36
TRDJ3-201ENST00000390476 EHMT2Q96KQ7 1210 aa6.13□□□□□ -1.43
TRDJ3-201ENST00000390476 PLPPR3Q6T4P5 718 aa6.11□□□□□ -1.43
TRDJ3-201ENST00000390476 KCNA4P22459 653 aa5.91□□□□□ -1.46
TRDJ3-201ENST00000390476 SENP3Q9H4L4 574 aaPredicted RBP5.89□□□□□ -1.47
TRDJ3-201ENST00000390476 ADRA2BP18089 450 aa5.83□□□□□ -1.48
TRDJ3-201ENST00000390476 CSRNP3Q8WYN3 585 aa5.74□□□□□ -1.49
TRDJ3-201ENST00000390476 SLC24A1O60721 1099 aa5.71□□□□□ -1.5
TRDJ3-201ENST00000390476 SLC4A1APQ9BWU0 796 aaKnown RBP5.68□□□□□ -1.5
TRDJ3-201ENST00000390476 PPP6R1Q9UPN7 881 aa5.64□□□□□ -1.51
TRDJ3-201ENST00000390476 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
TRDJ3-201ENST00000390476 FOXD1Q16676 465 aa5.48□□□□□ -1.53
TRDJ3-201ENST00000390476 PPP4R3CPQ6ZMV5 832 aa5.48□□□□□ -1.53
TRDJ3-201ENST00000390476 ZBTB22O15209 634 aa5.46□□□□□ -1.54
TRDJ3-201ENST00000390476 AMER1Q5JTC6 1135 aaPredicted RBP5.43□□□□□ -1.54
TRDJ3-201ENST00000390476 NCBP3Q53F19 620 aaKnown RBP5.41□□□□□ -1.54
TRDJ3-201ENST00000390476 NPM3O75607 178 aaKnown RBP5.4□□□□□ -1.54
TRDJ3-201ENST00000390476 PIAS4Q8N2W9 510 aaPredicted RBP5.3□□□□□ -1.56
TRDJ3-201ENST00000390476 FOXD4L1Q9NU39 408 aa5.25□□□□□ -1.57
TRDJ3-201ENST00000390476 FKBP8Q14318 412 aa5.21□□□□□ -1.58
TRDJ3-201ENST00000390476 CNKSR2Q8WXI2 1034 aa5.18□□□□□ -1.58
TRDJ3-201ENST00000390476 PRKCSHP14314 528 aaPredicted RBP5.1□□□□□ -1.59
TRDJ3-201ENST00000390476 SCAF1Q9H7N4 1312 aaKnown RBP5.05□□□□□ -1.6
TRDJ3-201ENST00000390476 MAPK8IP2Q13387 824 aaPredicted RBP5.04□□□□□ -1.6
TRDJ3-201ENST00000390476 HAP1P54257 671 aaPredicted RBP5.02□□□□□ -1.61
TRDJ3-201ENST00000390476 PLCB2Q00722 1185 aa5.02□□□□□ -1.61
TRDJ3-201ENST00000390476 SLC4A2P04920 1241 aa5□□□□□ -1.61
TRDJ3-201ENST00000390476 DNAJC5BQ9UF47 199 aa4.98□□□□□ -1.61
TRDJ3-201ENST00000390476 DCAF8L2P0C7V8 631 aa4.97□□□□□ -1.61
TRDJ3-201ENST00000390476 BCANQ96GW7 911 aa4.97□□□□□ -1.61
TRDJ3-201ENST00000390476 RNF216Q9NWF9 866 aaPredicted RBP4.97□□□□□ -1.61
TRDJ3-201ENST00000390476 TAOK2Q9UL54 1235 aa4.97□□□□□ -1.61
TRDJ3-201ENST00000390476 MYCNP04198 464 aaPredicted RBP4.93□□□□□ -1.62
TRDJ3-201ENST00000390476 ATXN8OSP0DMR3 200 aa4.93□□□□□ -1.62
TRDJ3-201ENST00000390476 TPRNQ4KMQ1 711 aa4.93□□□□□ -1.62
TRDJ3-201ENST00000390476 ATF5Q9Y2D1 282 aaPredicted RBP4.87□□□□□ -1.63
TRDJ3-201ENST00000390476 FBLN2P98095 1184 aa4.83□□□□□ -1.64
TRDJ3-201ENST00000390476 VSIG10Q8N0Z9 540 aa4.83□□□□□ -1.64
TRDJ3-201ENST00000390476 TIMELESSQ9UNS1 1208 aa4.83□□□□□ -1.64
TRDJ3-201ENST00000390476 HOXD11P31277 338 aaPredicted RBP4.82□□□□□ -1.64
TRDJ3-201ENST00000390476 KDM2AQ9Y2K7 1162 aa4.82□□□□□ -1.64
TRDJ3-201ENST00000390476 TULP1O00294 542 aaPredicted RBP4.81□□□□□ -1.64
TRDJ3-201ENST00000390476 MSH5O43196 834 aa4.8□□□□□ -1.64
TRDJ3-201ENST00000390476 VASPP50552 380 aaPredicted RBP4.78□□□□□ -1.64
TRDJ3-201ENST00000390476 FBXO3Q9UK99 471 aa4.78□□□□□ -1.64
TRDJ3-201ENST00000390476 DMRT2Q9Y5R5 561 aa4.78□□□□□ -1.64
TRDJ3-201ENST00000390476 PAXIP1Q6ZW49 1069 aaPredicted RBP4.77□□□□□ -1.65
TRDJ3-201ENST00000390476 CFAP44Q96MT7 982 aa4.77□□□□□ -1.65
TRDJ3-201ENST00000390476 PKD2Q13563 968 aa4.76□□□□□ -1.65
TRDJ3-201ENST00000390476 IFNLR1Q8IU57 520 aaPredicted RBP4.76□□□□□ -1.65
TRDJ3-201ENST00000390476 DAXXQ9UER7 740 aaPredicted RBP4.76□□□□□ -1.65
TRDJ3-201ENST00000390476 SPDYE4A6NLX3 237 aa4.74□□□□□ -1.65
TRDJ3-201ENST00000390476 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.73□□□□□ -1.65
TRDJ3-201ENST00000390476 NPM1P06748 294 aaKnown RBP eCLIP4.71□□□□□ -1.66
TRDJ3-201ENST00000390476 TSHZ2Q9NRE2 1034 aa4.71□□□□□ -1.66
TRDJ3-201ENST00000390476 DCAF8L1A6NGE4 600 aa4.69□□□□□ -1.66
TRDJ3-201ENST00000390476 BBXQ8WY36 941 aaPredicted RBP4.69□□□□□ -1.66
TRDJ3-201ENST00000390476 GTF3C3Q9Y5Q9 886 aa4.69□□□□□ -1.66
TRDJ3-201ENST00000390476 ARXQ96QS3 562 aa4.68□□□□□ -1.66
TRDJ3-201ENST00000390476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRDJ3-201ENST00000390476 ECM2O94769 699 aaPredicted RBP4.67□□□□□ -1.66
TRDJ3-201ENST00000390476 NBR1Q14596 966 aa4.67□□□□□ -1.66
TRDJ3-201ENST00000390476 SAMD1Q6SPF0 538 aaPredicted RBP4.67□□□□□ -1.66
TRDJ3-201ENST00000390476 ZNF219Q9P2Y4 722 aaPredicted RBP4.67□□□□□ -1.66
TRDJ3-201ENST00000390476 MKRN4PQ13434 485 aaPredicted RBP4.65□□□□□ -1.67
TRDJ3-201ENST00000390476 U3KPZ7 1027 aaPredicted RBP4.65□□□□□ -1.67
TRDJ3-201ENST00000390476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.64□□□□□ -1.67
TRDJ3-201ENST00000390476 HNRNPUL2Q1KMD3 747 aaKnown RBP4.64□□□□□ -1.67
TRDJ3-201ENST00000390476 PROM2Q8N271 834 aa4.64□□□□□ -1.67
TRDJ3-201ENST00000390476 RGL2O15211 777 aa4.63□□□□□ -1.67
TRDJ3-201ENST00000390476 SPRYD3Q8NCJ5 442 aa4.63□□□□□ -1.67
TRDJ3-201ENST00000390476 KLHL34Q8N239 644 aa4.62□□□□□ -1.67
TRDJ3-201ENST00000390476 C14orf37Q86TY3 774 aa4.61□□□□□ -1.67
TRDJ3-201ENST00000390476 HOMEZQ8IX15 550 aa4.61□□□□□ -1.67
TRDJ3-201ENST00000390476 TMEM132AQ24JP5 1023 aa4.6□□□□□ -1.67
TRDJ3-201ENST00000390476 CHGAP10645 457 aaKnown RBP4.59□□□□□ -1.67
TRDJ3-201ENST00000390476 SPOCK2Q92563 424 aa4.59□□□□□ -1.67
TRDJ3-201ENST00000390476 DNAJC5Q9H3Z4 198 aa4.53□□□□□ -1.68
TRDJ3-201ENST00000390476 SUPT5HO00267 1087 aaKnown RBP4.52□□□□□ -1.69
TRDJ3-201ENST00000390476 ERICH6Q7L0X2 663 aa4.52□□□□□ -1.69
TRDJ3-201ENST00000390476 CIZ1Q9ULV3 898 aaPredicted RBP4.52□□□□□ -1.69
TRDJ3-201ENST00000390476 PLCD3Q8N3E9 789 aa4.51□□□□□ -1.69
TRDJ3-201ENST00000390476 PODXL2Q9NZ53 605 aa4.49□□□□□ -1.69
TRDJ3-201ENST00000390476 TRHP20396 242 aaPredicted RBP4.48□□□□□ -1.69
TRDJ3-201ENST00000390476 APLP2Q06481 763 aa4.47□□□□□ -1.69
TRDJ3-201ENST00000390476 POLA2Q14181 598 aa4.47□□□□□ -1.69
TRDJ3-201ENST00000390476 RANGAP1P46060 587 aaPredicted RBP4.46□□□□□ -1.7
TRDJ3-201ENST00000390476 MIER1Q8N108 512 aa4.46□□□□□ -1.7
TRDJ3-201ENST00000390476 NKX1-1Q15270 411 aaPredicted RBP4.45□□□□□ -1.7
TRDJ3-201ENST00000390476 HS6ST3Q8IZP7 471 aa4.45□□□□□ -1.7
TRDJ3-201ENST00000390476 SPINK5Q9NQ38 1064 aaPredicted RBP4.44□□□□□ -1.7
TRDJ3-201ENST00000390476 RNF25Q96BH1 459 aaPredicted RBP4.43□□□□□ -1.7
TRDJ3-201ENST00000390476 BRPF1P55201 1214 aaPredicted RBP4.42□□□□□ -1.7
TRDJ3-201ENST00000390476 GTPBP6O43824 516 aaPredicted RBP4.41□□□□□ -1.7
TRDJ3-201ENST00000390476 STAG3Q9UJ98 1225 aa4.41□□□□□ -1.7
TRDJ3-201ENST00000390476 UBTFP17480 764 aaKnown RBP4.4□□□□□ -1.71
TRDJ3-201ENST00000390476 LMOD2Q6P5Q4 547 aa4.4□□□□□ -1.71
TRDJ3-201ENST00000390476 ABCB7O75027 752 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms