RNA–Protein interactions for RNA: ENST00000525799.1

PTPN22-206, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-206ENST00000525799 AEBP2Q6ZN18 517 aaPredicted RBP12.1□□□□□ -0.47
PTPN22-206ENST00000525799 CHIC1Q5VXU3 224 aa11.32□□□□□ -0.6
PTPN22-206ENST00000525799 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
PTPN22-206ENST00000525799 SENP3Q9H4L4 574 aaPredicted RBP10.46□□□□□ -0.73
PTPN22-206ENST00000525799 PHF23Q9BUL5 403 aaPredicted RBP10.21□□□□□ -0.78
PTPN22-206ENST00000525799 FOXD1Q16676 465 aa9.81□□□□□ -0.84
PTPN22-206ENST00000525799 MSH5O43196 834 aa9.49□□□□□ -0.89
PTPN22-206ENST00000525799 PIAS4Q8N2W9 510 aaPredicted RBP9.01□□□□□ -0.97
PTPN22-206ENST00000525799 CACNB1Q02641 598 aaPredicted RBP8.66□□□□□ -1.02
PTPN22-206ENST00000525799 PPP6R1Q9UPN7 881 aa8.62□□□□□ -1.03
PTPN22-206ENST00000525799 ADRA2BP18089 450 aa8.55□□□□□ -1.04
PTPN22-206ENST00000525799 POTEHQ6S545 545 aa8.49□□□□□ -1.05
PTPN22-206ENST00000525799 PLPPR3Q6T4P5 718 aa8.33□□□□□ -1.08
PTPN22-206ENST00000525799 DMRT2Q9Y5R5 561 aa8.18□□□□□ -1.1
PTPN22-206ENST00000525799 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
PTPN22-206ENST00000525799 RNF39Q9H2S5 420 aa8.02□□□□□ -1.13
PTPN22-206ENST00000525799 DCAF8L1A6NGE4 600 aa7.87□□□□□ -1.15
PTPN22-206ENST00000525799 C1QBPQ07021 282 aaKnown RBP7.87□□□□□ -1.15
PTPN22-206ENST00000525799 SCAF1Q9H7N4 1312 aaKnown RBP7.86□□□□□ -1.15
PTPN22-206ENST00000525799 HOXD11P31277 338 aaPredicted RBP7.6□□□□□ -1.19
PTPN22-206ENST00000525799 DNAJC5BQ9UF47 199 aa7.5□□□□□ -1.21
PTPN22-206ENST00000525799 PLSCR2Q9NRY7 297 aa7.47□□□□□ -1.21
PTPN22-206ENST00000525799 SP7Q8TDD2 431 aaPredicted RBP7.37□□□□□ -1.23
PTPN22-206ENST00000525799 RNF216Q9NWF9 866 aaPredicted RBP7.36□□□□□ -1.23
PTPN22-206ENST00000525799 DSG3P32926 999 aa7.26□□□□□ -1.25
PTPN22-206ENST00000525799 CNKSR2Q8WXI2 1034 aa7.24□□□□□ -1.25
PTPN22-206ENST00000525799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN22-206ENST00000525799 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
PTPN22-206ENST00000525799 CAPN15O75808 1086 aa7.14□□□□□ -1.27
PTPN22-206ENST00000525799 SPINK5Q9NQ38 1064 aaPredicted RBP7.1□□□□□ -1.27
PTPN22-206ENST00000525799 CHRDL2Q6WN34 429 aa7.09□□□□□ -1.28
PTPN22-206ENST00000525799 U3KPZ7 1027 aaPredicted RBP7□□□□□ -1.29
PTPN22-206ENST00000525799 RBM42Q9BTD8 480 aaKnown RBP6.98□□□□□ -1.29
PTPN22-206ENST00000525799 ABCB7O75027 752 aa6.9□□□□□ -1.3
PTPN22-206ENST00000525799 LHX8Q68G74 356 aa6.88□□□□□ -1.31
PTPN22-206ENST00000525799 TRHP20396 242 aaPredicted RBP6.85□□□□□ -1.31
PTPN22-206ENST00000525799 HAX1O00165 279 aa6.83□□□□□ -1.32
PTPN22-206ENST00000525799 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
PTPN22-206ENST00000525799 NCBP3Q53F19 620 aaKnown RBP6.82□□□□□ -1.32
PTPN22-206ENST00000525799 APLP2Q06481 763 aa6.77□□□□□ -1.33
PTPN22-206ENST00000525799 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
PTPN22-206ENST00000525799 NPM3O75607 178 aaKnown RBP6.73□□□□□ -1.33
PTPN22-206ENST00000525799 PCDH10Q9P2E7 1040 aa6.72□□□□□ -1.33
PTPN22-206ENST00000525799 EVX2Q03828 476 aa6.67□□□□□ -1.34
PTPN22-206ENST00000525799 KCNA4P22459 653 aa6.65□□□□□ -1.35
PTPN22-206ENST00000525799 AKT1S1Q96B36 256 aa6.65□□□□□ -1.35
PTPN22-206ENST00000525799 FXR2P51116 673 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTPN22-206ENST00000525799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.59□□□□□ -1.35
PTPN22-206ENST00000525799 HNRNPUL2Q1KMD3 747 aaKnown RBP6.59□□□□□ -1.35
PTPN22-206ENST00000525799 REM2Q8IYK8 340 aaPredicted RBP6.58□□□□□ -1.36
PTPN22-206ENST00000525799 PITPNM1O00562 1244 aa6.52□□□□□ -1.37
PTPN22-206ENST00000525799 POTEMA6NI47 508 aa6.52□□□□□ -1.37
PTPN22-206ENST00000525799 POLA2Q14181 598 aa6.5□□□□□ -1.37
PTPN22-206ENST00000525799 SAMD1Q6SPF0 538 aaPredicted RBP6.5□□□□□ -1.37
PTPN22-206ENST00000525799 GABBR2O75899 941 aa6.5□□□□□ -1.37
PTPN22-206ENST00000525799 SLC4A2P04920 1241 aa6.49□□□□□ -1.37
PTPN22-206ENST00000525799 POTEGQ6S5H5 508 aa6.44□□□□□ -1.38
PTPN22-206ENST00000525799 C19orf67A6NJJ6 358 aa6.42□□□□□ -1.38
PTPN22-206ENST00000525799 ZBTB12Q9Y330 459 aaPredicted RBP6.35□□□□□ -1.39
PTPN22-206ENST00000525799 POTEIP0CG38 1075 aa6.34□□□□□ -1.39
PTPN22-206ENST00000525799 PRKAR2AP13861 404 aaKnown RBP6.34□□□□□ -1.39
PTPN22-206ENST00000525799 OSCARQ8IYS5 282 aa6.33□□□□□ -1.4
PTPN22-206ENST00000525799 SLC4A1APQ9BWU0 796 aaKnown RBP6.28□□□□□ -1.4
PTPN22-206ENST00000525799 OTUD5Q96G74 571 aa6.25□□□□□ -1.41
PTPN22-206ENST00000525799 MYCNP04198 464 aaPredicted RBP6.23□□□□□ -1.41
PTPN22-206ENST00000525799 FOXD4L1Q9NU39 408 aa6.2□□□□□ -1.42
PTPN22-206ENST00000525799 CLCN6P51797 869 aa6.19□□□□□ -1.42
PTPN22-206ENST00000525799 DCBLD2Q96PD2 775 aa6.19□□□□□ -1.42
PTPN22-206ENST00000525799 CLEC11AQ9Y240 323 aa6.16□□□□□ -1.42
PTPN22-206ENST00000525799 SPDYE1Q8NFV5 336 aaPredicted RBP6.15□□□□□ -1.42
PTPN22-206ENST00000525799 ZBTB22O15209 634 aa6.12□□□□□ -1.43
PTPN22-206ENST00000525799 POTEB2H3BUK9 544 aa6.11□□□□□ -1.43
PTPN22-206ENST00000525799 CD44P16070 742 aaKnown RBP6.1□□□□□ -1.43
PTPN22-206ENST00000525799 CHADLQ6NUI6 762 aa6.1□□□□□ -1.43
PTPN22-206ENST00000525799 SPDYE2BA6NHP3 402 aa6.08□□□□□ -1.44
PTPN22-206ENST00000525799 SPDYE6P0CI01 402 aa6.08□□□□□ -1.44
PTPN22-206ENST00000525799 SPDYE2Q495Y8 402 aa6.08□□□□□ -1.44
PTPN22-206ENST00000525799 ATF5Q9Y2D1 282 aaPredicted RBP6.07□□□□□ -1.44
PTPN22-206ENST00000525799 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
PTPN22-206ENST00000525799 FAM163AQ96GL9 167 aaPredicted RBP6□□□□□ -1.45
PTPN22-206ENST00000525799 ATXN8OSP0DMR3 200 aa5.99□□□□□ -1.45
PTPN22-206ENST00000525799 ZNF579Q8NAF0 562 aaKnown RBP5.98□□□□□ -1.45
PTPN22-206ENST00000525799 PRR29P0C7W0 189 aa5.96□□□□□ -1.45
PTPN22-206ENST00000525799 CDAN1Q8IWY9 1227 aa5.96□□□□□ -1.45
PTPN22-206ENST00000525799 FARP1Q9Y4F1 1045 aaPredicted RBP5.96□□□□□ -1.46
PTPN22-206ENST00000525799 GALR2O43603 387 aaPredicted RBP5.95□□□□□ -1.46
PTPN22-206ENST00000525799 MAMSTRQ6ZN01 415 aa5.95□□□□□ -1.46
PTPN22-206ENST00000525799 MMRN1Q13201 1228 aa5.92□□□□□ -1.46
PTPN22-206ENST00000525799 SSUH2Q9Y2M2 353 aa5.91□□□□□ -1.46
PTPN22-206ENST00000525799 POTEJP0CG39 1038 aa5.9□□□□□ -1.46
PTPN22-206ENST00000525799 ZRANB1Q9UGI0 708 aa5.9□□□□□ -1.46
PTPN22-206ENST00000525799 ZNF692Q9BU19 519 aaPredicted RBP5.89□□□□□ -1.47
PTPN22-206ENST00000525799 FBLN2P98095 1184 aa5.88□□□□□ -1.47
PTPN22-206ENST00000525799 PELP1Q8IZL8 1130 aaKnown RBP5.88□□□□□ -1.47
PTPN22-206ENST00000525799 CSRNP3Q8WYN3 585 aa5.87□□□□□ -1.47
PTPN22-206ENST00000525799 METRNQ9UJH8 293 aa5.87□□□□□ -1.47
PTPN22-206ENST00000525799 SCUBE2Q9NQ36 999 aa5.87□□□□□ -1.47
PTPN22-206ENST00000525799 SPNS2Q8IVW8 549 aa5.84□□□□□ -1.47
PTPN22-206ENST00000525799 EHMT2Q96KQ7 1210 aa5.84□□□□□ -1.47
PTPN22-206ENST00000525799 C7P10643 843 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms