Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GRIN3BO60391 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
GRIN3BO60391 MIR26A1-201ENST00000362205 77 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 Y_RNA.796-201ENST00000364268 102 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 SNORD73B-201ENST00000364394 72 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 RNU6-1164P-201ENST00000364428 107 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 Y_RNA.294-201ENST00000364916 102 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 Y_RNA.799-201ENST00000364992 102 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 Y_RNA.332-201ENST00000365271 113 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 RNU6-407P-201ENST00000365280 104 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 Y_RNA.388-201ENST00000383919 113 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 RNU6-376P-201ENST00000384731 106 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 RNU6-1228P-201ENST00000391014 107 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 RNU2-63P-201ENST00000410792 194 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 AC093259.1-201ENST00000509755 300 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 RNU5E-3P-201ENST00000515913 68 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 MIR3616-201ENST00000584070 92 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
GRIN3BO60391 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 AP001340.1-201ENST00000624405 217 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 CENPCP1-201ENST00000533085 2578 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 ZNF702P-202ENST00000434269 1966 ntBASIC3.21□□□□□ -1.9
GRIN3BO60391 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
GRIN3BO60391 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
GRIN3BO60391 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 Y_RNA.229-201ENST00000364347 113 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 RNU6-117P-201ENST00000365415 107 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 RNU2-48P-201ENST00000410694 191 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 AC123900.1-201ENST00000420390 96 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.2□□□□□ -1.9
GRIN3BO60391 RNU6-453P-201ENST00000516819 85 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 PRELID2P1-201ENST00000552837 301 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 MTND5P34-201ENST00000568888 325 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.2□□□□□ -1.9
GRIN3BO60391 AC012640.5-201ENST00000623897 319 ntBASIC3.2□□□□□ -1.9
GRIN3BO60391 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
GRIN3BO60391 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
GRIN3BO60391 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
GRIN3BO60391 AL356292.1-201ENST00000283110 373 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 RNY3P5-201ENST00000384127 102 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.19□□□□□ -1.9
GRIN3BO60391 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.19□□□□□ -1.9
GRIN3BO60391 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.19□□□□□ -1.9
GRIN3BO60391 SNORD33.1-201ENST00000516213 88 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 RNU6-1007P-201ENST00000516586 107 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 POLR3GP1-201ENST00000594073 261 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 AC108081.1-201ENST00000604358 221 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
GRIN3BO60391 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
GRIN3BO60391 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 RNU6-235P-201ENST00000362644 107 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 RNU6-674P-201ENST00000363831 107 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 SNORA25.7-201ENST00000364375 127 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 Y_RNA.280-201ENST00000364765 112 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 AC245047.8-201ENST00000456455 284 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 RN7SKP179-201ENST00000516126 217 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 NDUFA5P6-201ENST00000542110 379 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.18□□□□□ -1.9
GRIN3BO60391 U7.2-201ENST00000607576 63 ntBASIC3.18□□□□□ -1.9
GRIN3BO60391 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.18□□□□□ -1.9
GRIN3BO60391 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.18□□□□□ -1.9
GRIN3BO60391 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GRIN3BO60391 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GRIN3BO60391 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.17□□□□□ -1.9
GRIN3BO60391 RNU6-199P-201ENST00000362954 107 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 Y_RNA.495-201ENST00000384435 112 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 MIR561-201ENST00000385216 97 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GRIN3BO60391 Y_RNA.630-201ENST00000411370 108 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 RNU6-772P-201ENST00000516042 105 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 RNU2-56P-201ENST00000516826 190 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 RNU6-856P-201ENST00000516959 98 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 AC090049.2-201ENST00000550377 109 ntBASIC3.17□□□□□ -1.9
GRIN3BO60391 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.17□□□□□ -1.9
GRIN3BO60391 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GRIN3BO60391 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GRIN3BO60391 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GRIN3BO60391 RNU6-768P-201ENST00000384683 107 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 RNU6-220P-201ENST00000390919 107 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 RNU6-1275P-201ENST00000391087 107 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 AL606845.1-201ENST00000404881 255 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 RNU6-437P-201ENST00000459408 95 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 RNU6-561P-201ENST00000516222 102 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 AC027419.1-201ENST00000522976 328 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 AP001328.1-201ENST00000528550 176 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 AC015720.1-201ENST00000565251 277 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 AL449363.1-201ENST00000617815 186 ntBASIC3.16□□□□□ -1.9
GRIN3BO60391 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.16□□□□□ -1.9
GRIN3BO60391 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.16□□□□□ -1.9
GRIN3BO60391 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.16□□□□□ -1.9
GRIN3BO60391 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
GRIN3BO60391 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.16□□□□□ -1.9
GRIN3BO60391 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
GRIN3BO60391 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.15□□□□□ -1.9
GRIN3BO60391 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms