RNA–Protein interactions for RNA: ENST00000364428.1

RNU6-1164P-201, Transcript of RNA, U6 small nuclear 1164, pseudogene, humanhuman

BASIC

Gene RNU6-1164P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1164P-201ENST00000364428 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
RNU6-1164P-201ENST00000364428 CHIC1Q5VXU3 224 aa13.53□□□□□ -0.24
RNU6-1164P-201ENST00000364428 SENP3Q9H4L4 574 aaPredicted RBP12.42□□□□□ -0.42
RNU6-1164P-201ENST00000364428 PHF23Q9BUL5 403 aaPredicted RBP12.14□□□□□ -0.47
RNU6-1164P-201ENST00000364428 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
RNU6-1164P-201ENST00000364428 FOXD1Q16676 465 aa11.55□□□□□ -0.56
RNU6-1164P-201ENST00000364428 MSH5O43196 834 aa11.12□□□□□ -0.63
RNU6-1164P-201ENST00000364428 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1164P-201ENST00000364428 ADRA2BP18089 450 aa10.36□□□□□ -0.75
RNU6-1164P-201ENST00000364428 PPP6R1Q9UPN7 881 aa10.35□□□□□ -0.75
RNU6-1164P-201ENST00000364428 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
RNU6-1164P-201ENST00000364428 CACNB1Q02641 598 aaPredicted RBP9.91□□□□□ -0.82
RNU6-1164P-201ENST00000364428 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
RNU6-1164P-201ENST00000364428 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
RNU6-1164P-201ENST00000364428 SCAF1Q9H7N4 1312 aaKnown RBP9.63□□□□□ -0.87
RNU6-1164P-201ENST00000364428 DCAF8L1A6NGE4 600 aa9.54□□□□□ -0.88
RNU6-1164P-201ENST00000364428 RNF39Q9H2S5 420 aa9.35□□□□□ -0.91
RNU6-1164P-201ENST00000364428 C1QBPQ07021 282 aaKnown RBP9.25□□□□□ -0.93
RNU6-1164P-201ENST00000364428 HOXD11P31277 338 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1164P-201ENST00000364428 POTEHQ6S545 545 aa9.08□□□□□ -0.96
RNU6-1164P-201ENST00000364428 PPP4R3CPQ6ZMV5 832 aa8.96□□□□□ -0.98
RNU6-1164P-201ENST00000364428 RNF216Q9NWF9 866 aaPredicted RBP8.96□□□□□ -0.98
RNU6-1164P-201ENST00000364428 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
RNU6-1164P-201ENST00000364428 DNAJC5BQ9UF47 199 aa8.89□□□□□ -0.99
RNU6-1164P-201ENST00000364428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.85□□□□□ -0.99
RNU6-1164P-201ENST00000364428 CAPN15O75808 1086 aa8.66□□□□□ -1.02
RNU6-1164P-201ENST00000364428 DSG3P32926 999 aa8.59□□□□□ -1.03
RNU6-1164P-201ENST00000364428 NCBP3Q53F19 620 aaKnown RBP8.57□□□□□ -1.04
RNU6-1164P-201ENST00000364428 SPINK5Q9NQ38 1064 aaPredicted RBP8.51□□□□□ -1.05
RNU6-1164P-201ENST00000364428 U3KPZ7 1027 aaPredicted RBP8.45□□□□□ -1.06
RNU6-1164P-201ENST00000364428 TRHP20396 242 aaPredicted RBP8.38□□□□□ -1.07
RNU6-1164P-201ENST00000364428 APLP2Q06481 763 aa8.37□□□□□ -1.07
RNU6-1164P-201ENST00000364428 ABCB7O75027 752 aa8.35□□□□□ -1.07
RNU6-1164P-201ENST00000364428 RBM42Q9BTD8 480 aaKnown RBP8.34□□□□□ -1.07
RNU6-1164P-201ENST00000364428 ZNF219Q9P2Y4 722 aaPredicted RBP8.33□□□□□ -1.08
RNU6-1164P-201ENST00000364428 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
RNU6-1164P-201ENST00000364428 NPM3O75607 178 aaKnown RBP8.29□□□□□ -1.08
RNU6-1164P-201ENST00000364428 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
RNU6-1164P-201ENST00000364428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
RNU6-1164P-201ENST00000364428 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
RNU6-1164P-201ENST00000364428 SAMD1Q6SPF0 538 aaPredicted RBP8.09□□□□□ -1.11
RNU6-1164P-201ENST00000364428 HAX1O00165 279 aa8.07□□□□□ -1.12
RNU6-1164P-201ENST00000364428 SLC4A2P04920 1241 aa8.02□□□□□ -1.13
RNU6-1164P-201ENST00000364428 POLA2Q14181 598 aa7.98□□□□□ -1.13
RNU6-1164P-201ENST00000364428 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
RNU6-1164P-201ENST00000364428 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
RNU6-1164P-201ENST00000364428 REM2Q8IYK8 340 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1164P-201ENST00000364428 ZBTB12Q9Y330 459 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1164P-201ENST00000364428 PLSCR2Q9NRY7 297 aa7.83□□□□□ -1.16
RNU6-1164P-201ENST00000364428 PITPNM1O00562 1244 aa7.79□□□□□ -1.16
RNU6-1164P-201ENST00000364428 FXR2P51116 673 aaKnown RBP eCLIP7.79□□□□□ -1.16
RNU6-1164P-201ENST00000364428 LHX8Q68G74 356 aa7.77□□□□□ -1.17
RNU6-1164P-201ENST00000364428 MYCNP04198 464 aaPredicted RBP7.75□□□□□ -1.17
RNU6-1164P-201ENST00000364428 EVX2Q03828 476 aa7.74□□□□□ -1.17
RNU6-1164P-201ENST00000364428 OSCARQ8IYS5 282 aa7.73□□□□□ -1.17
RNU6-1164P-201ENST00000364428 KCNA4P22459 653 aa7.72□□□□□ -1.17
RNU6-1164P-201ENST00000364428 PRKAR2AP13861 404 aaKnown RBP7.64□□□□□ -1.19
RNU6-1164P-201ENST00000364428 GABBR2O75899 941 aa7.62□□□□□ -1.19
RNU6-1164P-201ENST00000364428 CLEC11AQ9Y240 323 aa7.6□□□□□ -1.19
RNU6-1164P-201ENST00000364428 C19orf67A6NJJ6 358 aa7.57□□□□□ -1.2
RNU6-1164P-201ENST00000364428 ATF5Q9Y2D1 282 aaPredicted RBP7.56□□□□□ -1.2
RNU6-1164P-201ENST00000364428 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
RNU6-1164P-201ENST00000364428 SPDYE2BA6NHP3 402 aa7.5□□□□□ -1.21
RNU6-1164P-201ENST00000364428 SPDYE6P0CI01 402 aa7.5□□□□□ -1.21
RNU6-1164P-201ENST00000364428 SPDYE2Q495Y8 402 aa7.5□□□□□ -1.21
RNU6-1164P-201ENST00000364428 FBLN2P98095 1184 aa7.46□□□□□ -1.22
RNU6-1164P-201ENST00000364428 DCBLD2Q96PD2 775 aa7.43□□□□□ -1.22
RNU6-1164P-201ENST00000364428 CHADLQ6NUI6 762 aa7.41□□□□□ -1.22
RNU6-1164P-201ENST00000364428 CLCN6P51797 869 aa7.39□□□□□ -1.23
RNU6-1164P-201ENST00000364428 PRR29P0C7W0 189 aa7.38□□□□□ -1.23
RNU6-1164P-201ENST00000364428 CD44P16070 742 aaKnown RBP7.38□□□□□ -1.23
RNU6-1164P-201ENST00000364428 ZNF692Q9BU19 519 aaPredicted RBP7.37□□□□□ -1.23
RNU6-1164P-201ENST00000364428 FOXD4L1Q9NU39 408 aa7.37□□□□□ -1.23
RNU6-1164P-201ENST00000364428 POTEMA6NI47 508 aa7.35□□□□□ -1.23
RNU6-1164P-201ENST00000364428 POTEIP0CG38 1075 aa7.35□□□□□ -1.23
RNU6-1164P-201ENST00000364428 POTEGQ6S5H5 508 aa7.31□□□□□ -1.24
RNU6-1164P-201ENST00000364428 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
RNU6-1164P-201ENST00000364428 SSUH2Q9Y2M2 353 aa7.25□□□□□ -1.25
RNU6-1164P-201ENST00000364428 FARP1Q9Y4F1 1045 aaPredicted RBP7.25□□□□□ -1.25
RNU6-1164P-201ENST00000364428 OTUD5Q96G74 571 aa7.24□□□□□ -1.25
RNU6-1164P-201ENST00000364428 SLC4A1APQ9BWU0 796 aaKnown RBP7.22□□□□□ -1.25
RNU6-1164P-201ENST00000364428 PABPN1Q86U42 306 aaKnown RBP eCLIP7.21□□□□□ -1.26
RNU6-1164P-201ENST00000364428 ZRANB1Q9UGI0 708 aa7.2□□□□□ -1.26
RNU6-1164P-201ENST00000364428 ATXN8OSP0DMR3 200 aa7.19□□□□□ -1.26
RNU6-1164P-201ENST00000364428 ZNF579Q8NAF0 562 aaKnown RBP7.17□□□□□ -1.26
RNU6-1164P-201ENST00000364428 MKRN4PQ13434 485 aaPredicted RBP7.15□□□□□ -1.26
RNU6-1164P-201ENST00000364428 PAK3O75914 559 aaPredicted RBP7.13□□□□□ -1.27
RNU6-1164P-201ENST00000364428 ZBTB22O15209 634 aa7.12□□□□□ -1.27
RNU6-1164P-201ENST00000364428 POTEB2H3BUK9 544 aa7.11□□□□□ -1.27
RNU6-1164P-201ENST00000364428 GALR2O43603 387 aaPredicted RBP7.11□□□□□ -1.27
RNU6-1164P-201ENST00000364428 MAMSTRQ6ZN01 415 aa7.11□□□□□ -1.27
RNU6-1164P-201ENST00000364428 FAM163AQ96GL9 167 aaPredicted RBP7.11□□□□□ -1.27
RNU6-1164P-201ENST00000364428 SCUBE2Q9NQ36 999 aa7.05□□□□□ -1.28
RNU6-1164P-201ENST00000364428 METRNQ9UJH8 293 aa7.03□□□□□ -1.28
RNU6-1164P-201ENST00000364428 C7P10643 843 aa7.01□□□□□ -1.29
RNU6-1164P-201ENST00000364428 SLC39A7Q92504 469 aa7.01□□□□□ -1.29
RNU6-1164P-201ENST00000364428 PHF12Q96QT6 1004 aa7□□□□□ -1.29
RNU6-1164P-201ENST00000364428 PELP1Q8IZL8 1130 aaKnown RBP6.98□□□□□ -1.29
RNU6-1164P-201ENST00000364428 NPM1P06748 294 aaKnown RBP eCLIP6.96□□□□□ -1.3
RNU6-1164P-201ENST00000364428 CDAN1Q8IWY9 1227 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms