Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC245047.8-201ENST00000456455 284 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RPS29P11-201ENST00000496507 171 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNU6-1333P-201ENST00000516162 93 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNU5F-4P-201ENST00000516581 114 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 AC026241.1-201ENST00000517873 2142 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 AC008739.2-201ENST00000597006 317 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
COL11A2P13942 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL11A2P13942 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL11A2P13942 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU6-1205P-201ENST00000363625 106 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU6-215P-201ENST00000365169 102 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 MIR147B-201ENST00000390185 80 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU6-855P-201ENST00000410395 104 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU6-383P-201ENST00000410864 94 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 AL445685.2-201ENST00000422551 342 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.5□□□□□ -2.01
COL11A2P13942 SNRPGP8-201ENST00000454064 226 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU6-561P-201ENST00000516222 102 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 RNU1-117P-201ENST00000517041 158 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.5□□□□□ -2.01
COL11A2P13942 MIR3658-201ENST00000636291 56 ntBASIC2.5□□□□□ -2.01
COL11A2P13942 AC010680.1-201ENST00000590024 3590 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 AC002546.1-201ENST00000588041 2504 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 RNU6-655P-201ENST00000362858 107 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 RNU6-1180P-201ENST00000364935 107 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 RNU6-969P-201ENST00000383900 105 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 Y_RNA.420-201ENST00000384043 110 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 Y_RNA.563-201ENST00000384707 108 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 HSPE1P21-201ENST00000438283 308 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 Y_RNA.686-201ENST00000516548 134 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 AP003357.1-201ENST00000604497 148 ntBASIC2.49□□□□□ -2.01
COL11A2P13942 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL11A2P13942 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL11A2P13942 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL11A2P13942 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL11A2P13942 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL11A2P13942 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL11A2P13942 Y_RNA.118-201ENST00000363300 101 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 SNORD14D-201ENST00000384390 87 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 SNORA79-201ENST00000408376 140 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 RNU6-1337P-201ENST00000516525 95 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 SNORA31.26-201ENST00000517250 137 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
COL11A2P13942 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL11A2P13942 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
COL11A2P13942 MIR767-201ENST00000390228 109 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 SNORA40.18-201ENST00000391200 128 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 AL355796.1-201ENST00000406706 323 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 RNA5SP270-201ENST00000411361 118 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.48□□□□□ -2.01
COL11A2P13942 RPL23AP7-203ENST00000449021 469 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 RNU7-57P-201ENST00000459540 60 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 AC117454.1-201ENST00000491120 168 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 RNU6-1098P-201ENST00000516772 96 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 AC127455.1-201ENST00000565496 145 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 MIR5002-201ENST00000584713 97 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 AC002064.3-201ENST00000623448 346 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 AP001340.1-201ENST00000624405 217 ntBASIC2.48□□□□□ -2.01
COL11A2P13942 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
COL11A2P13942 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL11A2P13942 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
COL11A2P13942 RNU6-1305P-201ENST00000364353 104 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 SNORA36B-201ENST00000410438 131 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 RNU2-49P-201ENST00000410666 184 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 RNA5SP38-201ENST00000410750 119 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 RNU2-55P-201ENST00000411146 174 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 AC097463.2-201ENST00000421074 142 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 AL035461.1-201ENST00000421490 332 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 RNU4-57P-201ENST00000515980 135 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 AC004486.1-201ENST00000546846 233 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.47□□□□□ -2.01
COL11A2P13942 SNRPGP19-201ENST00000603826 189 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 AC005972.2-201ENST00000604690 348 ntBASIC2.47□□□□□ -2.01
COL11A2P13942 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL11A2P13942 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL11A2P13942 Y_RNA.261-201ENST00000364631 102 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 RNU6-407P-201ENST00000365280 104 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 RNU6-597P-201ENST00000365620 102 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 RNU6-643P-201ENST00000384018 107 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 MIR1283-1-201ENST00000408494 87 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
COL11A2P13942 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.46□□□□□ -2.02
COL11A2P13942 RNU7-197P-201ENST00000458836 62 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 RNU2-56P-201ENST00000516826 190 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 MIR4781-201ENST00000585250 76 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.46□□□□□ -2.02
COL11A2P13942 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 Y_RNA.783-201ENST00000613546 102 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
COL11A2P13942 AL136164.4-201ENST00000625013 2135 ntBASIC2.46□□□□□ -2.02
COL11A2P13942 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
COL11A2P13942 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL11A2P13942 Y_RNA.251-201ENST00000364551 99 ntBASIC2.45□□□□□ -2.02
COL11A2P13942 RNU6-1082P-201ENST00000364574 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms