RNA–Protein interactions for RNA: ENST00000515980.2

RNU4-57P-201, Transcript of RNA, U4 small nuclear 57, pseudogene, humanhuman

BASIC

Gene RNU4-57P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-57P-201ENST00000515980 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
RNU4-57P-201ENST00000515980 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
RNU4-57P-201ENST00000515980 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
RNU4-57P-201ENST00000515980 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
RNU4-57P-201ENST00000515980 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
RNU4-57P-201ENST00000515980 FOXD1Q16676 465 aa13.87□□□□□ -0.19
RNU4-57P-201ENST00000515980 MSH5O43196 834 aa13.34□□□□□ -0.27
RNU4-57P-201ENST00000515980 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
RNU4-57P-201ENST00000515980 PPP6R1Q9UPN7 881 aa12.32□□□□□ -0.44
RNU4-57P-201ENST00000515980 ADRA2BP18089 450 aa12.27□□□□□ -0.45
RNU4-57P-201ENST00000515980 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
RNU4-57P-201ENST00000515980 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
RNU4-57P-201ENST00000515980 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
RNU4-57P-201ENST00000515980 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
RNU4-57P-201ENST00000515980 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
RNU4-57P-201ENST00000515980 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
RNU4-57P-201ENST00000515980 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
RNU4-57P-201ENST00000515980 POTEHQ6S545 545 aa11.13□□□□□ -0.63
RNU4-57P-201ENST00000515980 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
RNU4-57P-201ENST00000515980 HOXD11P31277 338 aaPredicted RBP10.81□□□□□ -0.68
RNU4-57P-201ENST00000515980 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
RNU4-57P-201ENST00000515980 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
RNU4-57P-201ENST00000515980 PPP4R3CPQ6ZMV5 832 aa10.45□□□□□ -0.74
RNU4-57P-201ENST00000515980 CNKSR2Q8WXI2 1034 aa10.44□□□□□ -0.74
RNU4-57P-201ENST00000515980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.74
RNU4-57P-201ENST00000515980 DSG3P32926 999 aa10.28□□□□□ -0.76
RNU4-57P-201ENST00000515980 CAPN15O75808 1086 aa10.24□□□□□ -0.77
RNU4-57P-201ENST00000515980 SPINK5Q9NQ38 1064 aaPredicted RBP10.15□□□□□ -0.78
RNU4-57P-201ENST00000515980 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
RNU4-57P-201ENST00000515980 U3KPZ7 1027 aaPredicted RBP10.03□□□□□ -0.8
RNU4-57P-201ENST00000515980 CHRDL2Q6WN34 429 aa9.98□□□□□ -0.81
RNU4-57P-201ENST00000515980 ABCB7O75027 752 aa9.92□□□□□ -0.82
RNU4-57P-201ENST00000515980 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
RNU4-57P-201ENST00000515980 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
RNU4-57P-201ENST00000515980 NCBP3Q53F19 620 aaKnown RBP9.85□□□□□ -0.83
RNU4-57P-201ENST00000515980 ZNF219Q9P2Y4 722 aaPredicted RBP9.79□□□□□ -0.84
RNU4-57P-201ENST00000515980 APLP2Q06481 763 aa9.74□□□□□ -0.85
RNU4-57P-201ENST00000515980 HAX1O00165 279 aa9.66□□□□□ -0.86
RNU4-57P-201ENST00000515980 NPM3O75607 178 aaKnown RBP9.65□□□□□ -0.86
RNU4-57P-201ENST00000515980 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
RNU4-57P-201ENST00000515980 PIP4P2Q8N4L2 257 aa9.55□□□□□ -0.88
RNU4-57P-201ENST00000515980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
RNU4-57P-201ENST00000515980 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
RNU4-57P-201ENST00000515980 AKT1S1Q96B36 256 aa9.45□□□□□ -0.9
RNU4-57P-201ENST00000515980 LHX8Q68G74 356 aa9.42□□□□□ -0.9
RNU4-57P-201ENST00000515980 SAMD1Q6SPF0 538 aaPredicted RBP9.41□□□□□ -0.9
RNU4-57P-201ENST00000515980 SLC4A2P04920 1241 aa9.39□□□□□ -0.91
RNU4-57P-201ENST00000515980 EVX2Q03828 476 aa9.38□□□□□ -0.91
RNU4-57P-201ENST00000515980 POLA2Q14181 598 aa9.37□□□□□ -0.91
RNU4-57P-201ENST00000515980 REM2Q8IYK8 340 aaPredicted RBP9.37□□□□□ -0.91
RNU4-57P-201ENST00000515980 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
RNU4-57P-201ENST00000515980 PITPNM1O00562 1244 aa9.29□□□□□ -0.92
RNU4-57P-201ENST00000515980 GABBR2O75899 941 aa9.16□□□□□ -0.94
RNU4-57P-201ENST00000515980 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
RNU4-57P-201ENST00000515980 OSCARQ8IYS5 282 aa9.14□□□□□ -0.95
RNU4-57P-201ENST00000515980 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
RNU4-57P-201ENST00000515980 PRKAR2AP13861 404 aaKnown RBP9.06□□□□□ -0.96
RNU4-57P-201ENST00000515980 MYCNP04198 464 aaPredicted RBP8.97□□□□□ -0.97
RNU4-57P-201ENST00000515980 POTEMA6NI47 508 aa8.94□□□□□ -0.98
RNU4-57P-201ENST00000515980 POTEIP0CG38 1075 aa8.92□□□□□ -0.98
RNU4-57P-201ENST00000515980 CLEC11AQ9Y240 323 aa8.91□□□□□ -0.98
RNU4-57P-201ENST00000515980 POTEGQ6S5H5 508 aa8.88□□□□□ -0.99
RNU4-57P-201ENST00000515980 KCNA4P22459 653 aa8.84□□□□□ -0.99
RNU4-57P-201ENST00000515980 SPDYE1Q8NFV5 336 aaPredicted RBP8.84□□□□□ -0.99
RNU4-57P-201ENST00000515980 DCBLD2Q96PD2 775 aa8.81□□□□□ -1
RNU4-57P-201ENST00000515980 CHADLQ6NUI6 762 aa8.79□□□□□ -1
RNU4-57P-201ENST00000515980 PCDH10Q9P2E7 1040 aa8.79□□□□□ -1
RNU4-57P-201ENST00000515980 ATF5Q9Y2D1 282 aaPredicted RBP8.79□□□□□ -1
RNU4-57P-201ENST00000515980 OTUD5Q96G74 571 aa8.77□□□□□ -1.01
RNU4-57P-201ENST00000515980 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
RNU4-57P-201ENST00000515980 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
RNU4-57P-201ENST00000515980 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
RNU4-57P-201ENST00000515980 CD44P16070 742 aaKnown RBP8.74□□□□□ -1.01
RNU4-57P-201ENST00000515980 CLCN6P51797 869 aa8.71□□□□□ -1.02
RNU4-57P-201ENST00000515980 PRR29P0C7W0 189 aa8.62□□□□□ -1.03
RNU4-57P-201ENST00000515980 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
RNU4-57P-201ENST00000515980 FBLN2P98095 1184 aa8.6□□□□□ -1.03
RNU4-57P-201ENST00000515980 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
RNU4-57P-201ENST00000515980 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
RNU4-57P-201ENST00000515980 ZNF579Q8NAF0 562 aaKnown RBP8.52□□□□□ -1.05
RNU4-57P-201ENST00000515980 SSUH2Q9Y2M2 353 aa8.52□□□□□ -1.05
RNU4-57P-201ENST00000515980 FAM163AQ96GL9 167 aaPredicted RBP8.51□□□□□ -1.05
RNU4-57P-201ENST00000515980 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
RNU4-57P-201ENST00000515980 ZRANB1Q9UGI0 708 aa8.49□□□□□ -1.05
RNU4-57P-201ENST00000515980 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
RNU4-57P-201ENST00000515980 FOXD4L1Q9NU39 408 aa8.44□□□□□ -1.06
RNU4-57P-201ENST00000515980 MAMSTRQ6ZN01 415 aa8.42□□□□□ -1.06
RNU4-57P-201ENST00000515980 PABPN1Q86U42 306 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNU4-57P-201ENST00000515980 CDAN1Q8IWY9 1227 aa8.39□□□□□ -1.07
RNU4-57P-201ENST00000515980 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
RNU4-57P-201ENST00000515980 PELP1Q8IZL8 1130 aaKnown RBP8.36□□□□□ -1.07
RNU4-57P-201ENST00000515980 SCUBE2Q9NQ36 999 aa8.35□□□□□ -1.07
RNU4-57P-201ENST00000515980 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
RNU4-57P-201ENST00000515980 MKRN4PQ13434 485 aaPredicted RBP8.33□□□□□ -1.08
RNU4-57P-201ENST00000515980 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
RNU4-57P-201ENST00000515980 PHF12Q96QT6 1004 aa8.3□□□□□ -1.08
RNU4-57P-201ENST00000515980 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
RNU4-57P-201ENST00000515980 C7P10643 843 aa8.29□□□□□ -1.08
RNU4-57P-201ENST00000515980 MMRN1Q13201 1228 aa8.25□□□□□ -1.09
RNU4-57P-201ENST00000515980 ATXN8OSP0DMR3 200 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms