Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 Y_RNA.572-201ENST00000384757 98 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 SNORA40-201ENST00000388090 126 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 AC010598.1-201ENST00000510378 103 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 MIR449C-201ENST00000516047 92 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 RNU7-115P-201ENST00000516433 55 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 RNU6-453P-201ENST00000516819 85 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 AC010332.2-201ENST00000613083 1904 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL6A1P12109 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
COL6A1P12109 Y_RNA.124-201ENST00000363339 93 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNA5SP99-201ENST00000364020 114 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 Y_RNA.229-201ENST00000364347 113 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 SNORD114-30-201ENST00000364448 72 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-728P-201ENST00000365375 104 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 SNORA20B-201ENST00000384220 132 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-975P-201ENST00000384296 105 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-1274P-201ENST00000384557 107 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 MIR15B-201ENST00000385045 98 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 AL355796.1-201ENST00000406706 323 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-257P-201ENST00000410238 98 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 AC006461.1-201ENST00000412637 326 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 AC010154.1-201ENST00000425857 269 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.86□□□□□ -1.95
COL6A1P12109 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-221P-201ENST00000459541 99 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 SCARNA8-201ENST00000515924 131 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 SNORA25.12-201ENST00000516202 82 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-1337P-201ENST00000516525 95 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 RNU6-586P-201ENST00000517265 104 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 MIR1273D-201ENST00000577266 86 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 AL049779.4-201ENST00000604500 156 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.86□□□□□ -1.95
COL6A1P12109 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL6A1P12109 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL6A1P12109 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL6A1P12109 AC009487.4-201ENST00000624969 3585 ntBASIC2.86□□□□□ -1.95
COL6A1P12109 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
COL6A1P12109 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL6A1P12109 SNORA27.1-201ENST00000362604 124 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 SNORD114-1-201ENST00000362705 72 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 U8.7-201ENST00000364940 136 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 SNORD31B-201ENST00000364977 69 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 RNU6-643P-201ENST00000384018 107 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 AL606845.1-201ENST00000404881 255 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 SNORA36B-201ENST00000410438 131 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.85□□□□□ -1.95
COL6A1P12109 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 AC008267.6-201ENST00000441664 139 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 AL137159.1-201ENST00000452808 512 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 RPS26P55-201ENST00000471178 356 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 RPL36AP21-201ENST00000490372 323 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 AC117454.1-201ENST00000491120 168 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 RN7SL636P-201ENST00000497504 294 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 RNU7-116P-201ENST00000516940 62 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 AC245884.12-201ENST00000615364 59 ntBASIC2.85□□□□□ -1.95
COL6A1P12109 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.85□□□□□ -1.95
COL6A1P12109 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL6A1P12109 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.84□□□□□ -1.95
COL6A1P12109 RNU6-818P-201ENST00000364837 108 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 RNU6-407P-201ENST00000365280 104 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 RNU6-1323P-201ENST00000384025 107 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 RNY3P5-201ENST00000384127 102 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 SNORD14D-201ENST00000384390 87 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 RNU6-1168P-201ENST00000390831 104 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 SNORD37.2-201ENST00000391075 66 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 RNU6-57P-201ENST00000411348 103 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.84□□□□□ -1.95
COL6A1P12109 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.84□□□□□ -1.95
COL6A1P12109 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.84□□□□□ -1.95
COL6A1P12109 RNU6-948P-201ENST00000516374 107 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 AP003357.1-201ENST00000604497 148 ntBASIC2.84□□□□□ -1.95
COL6A1P12109 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
COL6A1P12109 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
COL6A1P12109 AC100821.1-201ENST00000523153 2479 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
COL6A1P12109 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL6A1P12109 RNU6-944P-201ENST00000364023 107 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 RNU6-438P-201ENST00000365561 103 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 MIR181A2-201ENST00000384863 110 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 MT-TT-201ENST00000387460 66 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 RNA5SP247-201ENST00000411181 105 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 AC008134.1-201ENST00000420943 193 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.83□□□□□ -1.96
COL6A1P12109 SNORD65B-201ENST00000459126 73 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 AC018630.3-201ENST00000542637 96 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.83□□□□□ -1.96
COL6A1P12109 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.83□□□□□ -1.96
COL6A1P12109 MIR4446-201ENST00000578505 67 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 AC006435.5-201ENST00000624486 112 ntBASIC2.83□□□□□ -1.96
COL6A1P12109 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
COL6A1P12109 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
COL6A1P12109 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL6A1P12109 RNU6-1290P-201ENST00000362957 109 ntBASIC2.82□□□□□ -1.96
COL6A1P12109 Y_RNA.172-201ENST00000363765 102 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms