Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 AC008267.6-201ENST00000441664 139 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-56P-201ENST00000516986 93 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 SNORD56.5-201ENST00000364281 72 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 SNORA68.1-201ENST00000364537 132 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 SNORA79-201ENST00000408376 140 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 MIR1278-201ENST00000408753 81 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-588P-201ENST00000410281 105 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 RPS27P1-201ENST00000450552 247 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 SNRPGP8-201ENST00000454064 226 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 CYP2C59P-201ENST00000457790 269 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 PRELID2P1-201ENST00000552837 301 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 AC015720.1-201ENST00000565251 277 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 AC090115.4-201ENST00000609970 188 ntBASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNCAIPQ9Y6H5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 SNORD45.3-201ENST00000363836 72 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 Y_RNA.261-201ENST00000364631 102 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 RNA5SP496-201ENST00000391240 109 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 AC023141.11-201ENST00000508864 202 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-991P-201ENST00000516168 107 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 RNU2-34P-201ENST00000516534 121 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 MIR3646-201ENST00000578301 84 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 AL049861.1-201ENST00000603130 150 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 CENPCP1-201ENST00000533085 2578 ntBASIC3.21□□□□□ -1.9
SNCAIPQ9Y6H5 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-674P-201ENST00000363831 107 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-117P-201ENST00000365415 107 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 MIR1253-201ENST00000408273 105 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 RNU4-43P-201ENST00000410628 137 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 CYCSP49-201ENST00000420810 319 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 UBBP3-201ENST00000445497 241 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 SNORA4.4-201ENST00000515921 135 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 MIR4438-201ENST00000585271 93 ntBASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
SNCAIPQ9Y6H5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 Y_RNA.218-201ENST00000364218 104 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 MIR539-201ENST00000365690 78 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 Y_RNA.393-201ENST00000383936 102 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-1080P-201ENST00000383982 107 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 SNORA72-201ENST00000384339 132 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-460P-201ENST00000391158 108 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 RNU7-197P-201ENST00000458836 62 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 AC092991.1-201ENST00000477176 376 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 RNA5SP24-201ENST00000516478 95 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-1234P-201ENST00000516877 103 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 RNU7-172P-201ENST00000517125 64 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 MIR3117-201ENST00000584034 78 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 AL929325.1-201ENST00000603096 117 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 AC011603.4-201ENST00000611325 277 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 AC064859.1-201ENST00000624741 174 ntBASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.19□□□□□ -1.9
SNCAIPQ9Y6H5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 Y_RNA.71-201ENST00000362892 104 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 RNU1-22P-201ENST00000363334 158 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 MIR512-1-201ENST00000384913 84 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 RN7SKP101-201ENST00000411376 320 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 AC123900.1-201ENST00000420390 96 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 MTCO1P44-201ENST00000441935 243 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 RPS29P21-201ENST00000496272 170 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 AC093259.1-201ENST00000509755 300 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 RNU6-1333P-201ENST00000516162 93 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 SNORD53-201ENST00000579969 78 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 MIR378D2-201ENST00000580636 98 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 TUG1_4.1-201ENST00000619464 181 ntBASIC3.18□□□□□ -1.9
SNCAIPQ9Y6H5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 RNU2-63P-201ENST00000410792 194 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AL357134.1-201ENST00000445848 426 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AC097462.1-201ENST00000514125 324 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 RNU2-56P-201ENST00000516826 190 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AL359881.1-201ENST00000602916 267 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AL355297.2-201ENST00000604792 129 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms