Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU1-18P-201ENST00000363062 164 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 SNORA33.1-201ENST00000364957 130 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-133P-201ENST00000383989 107 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR125B2-201ENST00000385128 89 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 HMGN2P27-201ENST00000427352 270 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 HMGN2P3-201ENST00000433603 273 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 HMGN2P5-201ENST00000436882 273 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 AC105272.1-201ENST00000438604 198 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL254P-201ENST00000460609 284 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL193P-201ENST00000491708 276 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 SNRPCP11-201ENST00000492453 205 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RNA5SP441-201ENST00000516809 88 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 AC116917.1-201ENST00000520558 305 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 AP003716.2-201ENST00000528260 108 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RNVU1-4-201ENST00000612985 164 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 uc_338.31-201ENST00000615595 186 ntBASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
KRTAP3-3Q9BYR6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SKP187-201ENST00000365536 330 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RNA5SP30-201ENST00000365552 115 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-246P-201ENST00000384702 107 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-360P-201ENST00000390944 104 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 AC004965.1-201ENST00000413033 213 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 AC007161.1-204ENST00000423039 460 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RPL29P14-201ENST00000495837 428 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU1-41P-201ENST00000516161 162 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU1-48P-201ENST00000516400 162 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR4311-201ENST00000580794 100 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR6793-201ENST00000612376 63 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 uc_338.29-201ENST00000615099 168 ntBASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP3-3Q9BYR6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 ABCC13-202ENST00000463099 3842 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 Z82217.1-201ENST00000625157 8149 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR1185-1-201ENST00000408598 86 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL442P-201ENST00000473804 320 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL633P-201ENST00000488974 297 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 SCARNA18.1-201ENST00000516330 83 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SKP238-201ENST00000516483 249 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 RNA5SP309-201ENST00000516670 106 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 SCARNA20.4-201ENST00000516969 131 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 AC040958.1-201ENST00000561102 201 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL290P-201ENST00000578661 300 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR4260-201ENST00000583107 67 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 AC092266.1-201ENST00000610958 165 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 AC090607.5-201ENST00000615692 224 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR6721-201ENST00000617181 87 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 AL138693.1-201ENST00000622219 129 ntBASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
KRTAP3-3Q9BYR6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
KRTAP3-3Q9BYR6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC2.71□□□□□ -1.98
KRTAP3-3Q9BYR6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
KRTAP3-3Q9BYR6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
KRTAP3-3Q9BYR6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
KRTAP3-3Q9BYR6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KRTAP3-3Q9BYR6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KRTAP3-3Q9BYR6 RNU1-150P-201ENST00000362491 162 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms