Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 Y_RNA.622-201ENST00000411091 108 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.629-201ENST00000411368 105 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 RPS12P2-201ENST00000439728 269 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 RAC1P5-201ENST00000512182 576 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 RNU6-965P-201ENST00000516721 96 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 RNU7-116P-201ENST00000516940 62 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 AL031274.2-201ENST00000599419 203 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 AC016717.2-201ENST00000609089 5141 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.71-201ENST00000362892 104 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.218-201ENST00000364218 104 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 MIR539-201ENST00000365690 78 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 RNU6-768P-201ENST00000384683 107 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 RPS27P1-201ENST00000450552 247 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 RNU6-437P-201ENST00000459408 95 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 AC080013.2-201ENST00000460866 323 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 RPL36AP21-201ENST00000490372 323 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 RNU6-1333P-201ENST00000516162 93 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 AL359881.1-201ENST00000602916 267 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 AC012640.5-201ENST00000623897 319 ntBASIC3.09□□□□□ -1.91
LINC00116Q8NCU8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LINC00116Q8NCU8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LINC00116Q8NCU8 Y_RNA.127-201ENST00000363386 109 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 RNU4-13P-201ENST00000364019 141 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 RNA5SP205-201ENST00000364653 136 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 RNY3P5-201ENST00000384127 102 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 RPL30P4-201ENST00000429309 333 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 AC026436.1-201ENST00000510537 270 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 RNU6-1234P-201ENST00000516877 103 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 AC025647.1-201ENST00000517879 253 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 MIR3646-201ENST00000578301 84 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 AC011603.4-201ENST00000611325 277 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 TUG1_4.1-201ENST00000619464 181 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 MIR1291-201ENST00000627649 87 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 MIR7515-201ENST00000637837 67 ntBASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LINC00116Q8NCU8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNA5SP139-201ENST00000364340 117 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNU4-41P-201ENST00000364426 143 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNU6-1180P-201ENST00000364935 107 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 SNORD6-201ENST00000365444 73 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 CD24P4-201ENST00000382840 243 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNU6-460P-201ENST00000391158 108 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 Y_RNA.587-201ENST00000391210 103 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNU6-588P-201ENST00000410281 105 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNA5SP511-201ENST00000410487 115 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 AC008134.1-201ENST00000420943 193 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 AC016925.1-201ENST00000458303 298 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNU7-197P-201ENST00000458836 62 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 AC090515.1-201ENST00000465295 476 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 RNU6-548P-201ENST00000517083 115 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 MIR7153-201ENST00000637758 57 ntBASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC00116Q8NCU8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNORD45.3-201ENST00000363836 72 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNORD116-14-201ENST00000383894 92 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNORD116-17-201ENST00000383929 92 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 Y_RNA.393-201ENST00000383936 102 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNORD116-15-201ENST00000384445 92 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 RNU6-136P-201ENST00000384663 107 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNORD116-19-201ENST00000384729 92 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 AL512604.1-201ENST00000404812 257 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNORA79-201ENST00000408376 140 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 RNU6-1328P-201ENST00000410938 106 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 Z82209.1-201ENST00000422141 2135 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 AC104389.3-201ENST00000445629 235 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 HMGN2P18-201ENST00000450680 270 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 SNRPGP8-201ENST00000454064 226 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 AC092991.1-201ENST00000477176 376 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 RPS27P22-201ENST00000478056 241 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 AC018630.3-201ENST00000542637 96 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 MIR1248-201ENST00000629190 106 ntBASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00116Q8NCU8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 RNU6-1240P-201ENST00000365155 104 ntBASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 RNU6-1235P-201ENST00000384559 107 ntBASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 RNA5SP496-201ENST00000391240 109 ntBASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 MIR1278-201ENST00000408753 81 ntBASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 RNU4-43P-201ENST00000410628 137 ntBASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 AC010154.1-201ENST00000425857 269 ntBASIC3.05□□□□□ -1.92
LINC00116Q8NCU8 ARF4P2-201ENST00000430209 526 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms