Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-11Q9BYQ6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 STX3-208ENST00000641815 3236 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR202-201ENST00000362219 110 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RNA5SP335-201ENST00000363817 110 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RNU1-46P-201ENST00000384425 164 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 SNORA37-201ENST00000384504 129 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR607-201ENST00000385241 96 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR652-201ENST00000385278 98 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RNA5SP339-201ENST00000390987 122 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RPS26P8-201ENST00000393490 348 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RNA5SP95-201ENST00000410319 137 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 COX6B1P1-201ENST00000415962 213 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC004552.1-201ENST00000419089 348 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 GNG5P5-201ENST00000420444 220 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC073264.2-201ENST00000448886 166 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 snoU13.1-201ENST00000459157 104 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 SNORA84-201ENST00000459229 133 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RPS26P3-201ENST00000470205 348 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC068522.1-201ENST00000482895 345 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC004057.1-201ENST00000485827 348 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RPS26P15-201ENST00000488067 348 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC015795.1-201ENST00000513669 327 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 RNA5SP470-201ENST00000516463 106 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC021678.3-201ENST00000517893 476 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC015912.2-201ENST00000571053 181 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC110741.2-201ENST00000605278 268 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AL139099.4-201ENST00000614802 114 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR7157-201ENST00000635801 60 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR6830-201ENST00000636015 70 ntBASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-11Q9BYQ6 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SNORA71.3-201ENST00000362582 128 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms