Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RNU7-6P-201ENST00000516845 62 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 AC011602.1-201ENST00000546484 331 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 MIR4769-201ENST00000584126 77 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 MIR7843-201ENST00000622274 79 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 RNU4-82P-201ENST00000362443 140 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.565-201ENST00000384719 101 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 MIR607-201ENST00000385241 96 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 MIR300-201ENST00000401138 83 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.611-201ENST00000410682 108 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 AC009238.1-201ENST00000442165 424 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 AC009237.6-201ENST00000446969 424 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 RPS27P22-201ENST00000478056 241 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 AC004486.1-201ENST00000546846 233 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 MIR3117-201ENST00000584034 78 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 MIR4753-201ENST00000585119 83 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 FAM35BP-202ENST00000497389 3337 ntBASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO4Q2I0M5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 RNU6-655P-201ENST00000362858 107 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.360-201ENST00000365512 102 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 MIR518F-201ENST00000384973 87 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 RPL30P4-201ENST00000429309 333 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 SNRPGP13-201ENST00000442212 177 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 UBL5P3-201ENST00000475112 231 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 TRBV12-2-201ENST00000489763 344 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 MIR4777-201ENST00000583710 86 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 U4atac.1-201ENST00000618345 95 ntBASIC3.34□□□□□ -1.87
RSPO4Q2I0M5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RSPO4Q2I0M5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.34□□□□□ -1.88
RSPO4Q2I0M5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.34□□□□□ -1.88
RSPO4Q2I0M5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RSPO4Q2I0M5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.34□□□□□ -1.88
RSPO4Q2I0M5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RSPO4Q2I0M5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.4-201ENST00000362333 112 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 SNORA2.2-201ENST00000365473 135 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 RNU6-975P-201ENST00000384296 105 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.607-201ENST00000410597 98 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 SNRPGP5-201ENST00000456003 220 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 GTF3AP2-201ENST00000557014 266 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 MIR4305-201ENST00000583252 102 ntBASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO4Q2I0M5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 IPO8P1-201ENST00000455509 3109 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.94-201ENST00000363068 106 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RNU1-22P-201ENST00000363334 158 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.155-201ENST00000363632 101 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 SNORA18-201ENST00000384416 132 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RNU6-733P-201ENST00000410759 104 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RNA5SP508-201ENST00000411327 119 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RNU7-172P-201ENST00000517125 64 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 MIR3618-201ENST00000580330 88 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 MIR4524B-201ENST00000581569 115 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 AC091304.10-201ENST00000641554 121 ntBASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO4Q2I0M5 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RNU6-363P-201ENST00000362895 105 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 SNORD32B-201ENST00000364460 84 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms