Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-1333P-201ENST00000516162 93 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 RNU6-561P-201ENST00000516222 102 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 RNU6-1337P-201ENST00000516525 95 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.07□□□□□ -1.92
SRGAP3O43295 AC109329.2-201ENST00000519658 482 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 AC027419.1-201ENST00000522976 328 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SRGAP3O43295 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.07□□□□□ -1.92
SRGAP3O43295 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SRGAP3O43295 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.07□□□□□ -1.92
SRGAP3O43295 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.07□□□□□ -1.92
SRGAP3O43295 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
SRGAP3O43295 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SRGAP3O43295 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
SRGAP3O43295 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SRGAP3O43295 RNU6-728P-201ENST00000365375 104 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 SNORA20B-201ENST00000384220 132 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 RNU6-1228P-201ENST00000391014 107 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 AL359511.1-201ENST00000402970 211 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 SNORA36B-201ENST00000410438 131 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 AL513328.1-201ENST00000446460 224 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.06□□□□□ -1.92
SRGAP3O43295 RPL23AP94-201ENST00000512518 302 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 RNA5SP112-201ENST00000515937 99 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 RNU7-115P-201ENST00000516433 55 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 AL359881.1-201ENST00000602916 267 ntBASIC3.06□□□□□ -1.92
SRGAP3O43295 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SRGAP3O43295 Y_RNA.521-201ENST00000384560 114 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 SNORA67.4-201ENST00000384688 142 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 MIR1294-201ENST00000408503 142 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 RNU6-57P-201ENST00000411348 103 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 AC114982.1-201ENST00000469402 321 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.05□□□□□ -1.92
SRGAP3O43295 RNU6-1234P-201ENST00000516877 103 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.05□□□□□ -1.92
SRGAP3O43295 MIR5688-201ENST00000580619 83 ntBASIC3.05□□□□□ -1.92
SRGAP3O43295 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.05□□□□□ -1.92
SRGAP3O43295 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
SRGAP3O43295 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.05□□□□□ -1.92
SRGAP3O43295 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SRGAP3O43295 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRGAP3O43295 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
SRGAP3O43295 ZNF702P-202ENST00000434269 1966 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 RNA5SP295-201ENST00000362655 121 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 Y_RNA.71-201ENST00000362892 104 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 Y_RNA.127-201ENST00000363386 109 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 RNA5SP205-201ENST00000364653 136 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 Y_RNA.542-201ENST00000384641 111 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 MIR300-201ENST00000401138 83 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 AC009414.1-201ENST00000427200 443 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.04□□□□□ -1.92
SRGAP3O43295 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.04□□□□□ -1.92
SRGAP3O43295 snoZ196.1-201ENST00000625269 89 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 AC080100.1-201ENST00000624239 5356 ntBASIC3.04□□□□□ -1.92
SRGAP3O43295 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.03□□□□□ -1.92
SRGAP3O43295 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU4-82P-201ENST00000362443 140 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU6-271P-201ENST00000363858 105 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU6-944P-201ENST00000364023 107 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SNORA25.6-201ENST00000364121 118 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU6-234P-201ENST00000365229 104 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 MIR539-201ENST00000365690 78 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SNORD116-14-201ENST00000383894 92 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SNORD116-17-201ENST00000383929 92 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SNORD116-15-201ENST00000384445 92 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SNORD20-201ENST00000384550 80 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU6-1274P-201ENST00000384557 107 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU6-768P-201ENST00000384683 107 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SNORD116-19-201ENST00000384729 92 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 Y_RNA.622-201ENST00000411091 108 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.03□□□□□ -1.92
SRGAP3O43295 AC104332.2-201ENST00000429959 156 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 AC104389.3-201ENST00000445629 235 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 AC016717.1-201ENST00000448918 286 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RPS26P55-201ENST00000471178 356 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RPL23AP54-201ENST00000495129 419 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.03□□□□□ -1.92
SRGAP3O43295 MRPS36P2-201ENST00000512569 299 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SCARNA17.1-201ENST00000516211 143 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SCARNA17.2-201ENST00000516334 143 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 RNU6-711P-201ENST00000517255 106 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.03□□□□□ -1.92
SRGAP3O43295 AL031274.2-201ENST00000599419 203 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 AC011603.4-201ENST00000611325 277 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 SCARNA17.4-201ENST00000614296 143 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 CTSLP2-204ENST00000629029 392 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 MIR6844-201ENST00000637122 62 ntBASIC3.03□□□□□ -1.92
SRGAP3O43295 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SRGAP3O43295 AL356292.1-201ENST00000283110 373 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 SNORA27.1-201ENST00000362604 124 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 RNU6-486P-201ENST00000363116 107 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 RNU6-1083P-201ENST00000384022 107 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 RNU6-460P-201ENST00000391158 108 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 HSPE1P13-201ENST00000451143 297 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 AC080013.2-201ENST00000460866 323 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 ATP5EP1-201ENST00000510257 156 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 AC127455.1-201ENST00000565496 145 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 MIR4298-201ENST00000584380 73 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms