Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR340-201ENST00000362125 95 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 MIR367-201ENST00000362299 68 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 RNA5SP432-201ENST00000362480 116 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 SNORD56.3-201ENST00000363507 71 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-818P-201ENST00000364837 108 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 RNY3P5-201ENST00000384127 102 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 MT-TT-201ENST00000387460 66 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-383P-201ENST00000410864 94 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-1007P-201ENST00000516586 107 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 MIR2276-201ENST00000516886 89 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 AC073476.4-201ENST00000628409 72 ntBASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.7□□□□□ -1.98
CDC42EP3Q9UKI2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 SNORD21-201ENST00000383953 95 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 Y_RNA.497-201ENST00000384447 98 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 MIR569-201ENST00000385228 96 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-220P-201ENST00000390919 107 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 AL606845.1-201ENST00000404881 255 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 RNU4-43P-201ENST00000410628 137 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 AC003685.2-201ENST00000422795 395 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 SNORA31.26-201ENST00000517250 137 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 AC015720.1-201ENST00000565251 277 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 DNAJC19P2-201ENST00000593340 302 ntBASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
CDC42EP3Q9UKI2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-151P-201ENST00000364158 107 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RNA5SP511-201ENST00000410487 115 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RN7SKP101-201ENST00000411376 320 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-561P-201ENST00000516222 102 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-63P-201ENST00000516690 95 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RN7SKP282-201ENST00000516824 299 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-856P-201ENST00000516959 98 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 MIR4435-1-201ENST00000582552 80 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 MIR3616-201ENST00000584070 92 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 U2.20-201ENST00000613956 192 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 AC017071.1-201ENST00000564407 2204 ntBASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CDC42EP3Q9UKI2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 RNU1-22P-201ENST00000363334 158 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 Y_RNA.337-201ENST00000365312 102 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 Y_RNA.586-201ENST00000391146 98 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 RNA5SP496-201ENST00000391240 109 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 RPL21P3-201ENST00000395517 478 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 RNU2-63P-201ENST00000410792 194 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AC022018.1-201ENST00000430685 241 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-437P-201ENST00000459408 95 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AC010409.1-201ENST00000487382 476 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AC018868.1-201ENST00000491307 315 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AC027419.1-201ENST00000522976 328 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 MIR548X2-201ENST00000579776 100 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 AL021707.8-201ENST00000609428 183 ntBASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDC42EP3Q9UKI2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-461P-201ENST00000364195 107 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-728P-201ENST00000365375 104 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 U8.9-201ENST00000365667 134 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 RNU6-643P-201ENST00000384018 107 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 SNORA72-201ENST00000384339 132 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 MIR15B-201ENST00000385045 98 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 MIR561-201ENST00000385216 97 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 RPL23AP58-201ENST00000440453 469 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 AL121914.1-201ENST00000450188 156 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 AC097462.1-201ENST00000514125 324 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 MIR3945-201ENST00000581853 98 ntBASIC2.66□□□□□ -1.98
CDC42EP3Q9UKI2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.98
CDC42EP3Q9UKI2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.65□□□□□ -1.98
CDC42EP3Q9UKI2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-959P-201ENST00000384671 107 ntBASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 RPS27P22-201ENST00000478056 241 ntBASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 RPL23AP54-201ENST00000495129 419 ntBASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 CKS1BP2-201ENST00000497342 240 ntBASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-426P-201ENST00000516464 97 ntBASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms