Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.7□□□□□ -1.98
NELFAQ9H3P2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.7□□□□□ -1.98
NELFAQ9H3P2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.7□□□□□ -1.98
NELFAQ9H3P2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.7□□□□□ -1.98
NELFAQ9H3P2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NELFAQ9H3P2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NELFAQ9H3P2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-199P-201ENST00000362954 107 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 Y_RNA.261-201ENST00000364631 102 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 Y_RNA.337-201ENST00000365312 102 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-438P-201ENST00000365561 103 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-144P-201ENST00000383951 107 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 MIR181A2-201ENST00000384863 110 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 SNORD37.2-201ENST00000391075 66 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 MIR513C-201ENST00000401352 84 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-735P-201ENST00000410612 107 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 Y_RNA.622-201ENST00000411091 108 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 AC003685.2-201ENST00000422795 395 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 MTND4LP9-201ENST00000427694 174 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 AL161788.1-201ENST00000441805 169 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 UBBP3-201ENST00000445497 241 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 AC074290.1-201ENST00000448883 135 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 HMGN2P18-201ENST00000450680 270 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RPS26P55-201ENST00000471178 356 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RPL23AP54-201ENST00000495129 419 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 CKS1BP2-201ENST00000497342 240 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-313P-201ENST00000516317 112 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-971P-201ENST00000516920 106 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 AL391903.3-201ENST00000612158 163 ntBASIC2.69□□□□□ -1.98
NELFAQ9H3P2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.69□□□□□ -1.98
NELFAQ9H3P2 RNU6-643P-201ENST00000384018 107 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 SNORA40-201ENST00000388090 126 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 MIR1278-201ENST00000408753 81 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 RNA5SP511-201ENST00000410487 115 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 RPL30P13-201ENST00000418873 348 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 HSPE1P13-201ENST00000451143 297 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 RN7SL20P-201ENST00000488827 297 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 RN7SKP43-201ENST00000516173 320 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 SNORA48.11-201ENST00000517015 89 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 AC025647.1-201ENST00000517879 253 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 AC018630.3-201ENST00000542637 96 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.68□□□□□ -1.98
NELFAQ9H3P2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NELFAQ9H3P2 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 AP003357.1-201ENST00000604497 148 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 AC012640.5-201ENST00000623897 319 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NELFAQ9H3P2 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
NELFAQ9H3P2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.68□□□□□ -1.98
NELFAQ9H3P2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 MIR22-201ENST00000362190 85 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 Y_RNA.542-201ENST00000384641 111 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 RNU6-1168P-201ENST00000390831 104 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 RNU6-1228P-201ENST00000391014 107 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 AC016909.1-201ENST00000415916 166 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 RNU6-1211P-201ENST00000459179 105 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 RN7SL633P-201ENST00000488974 297 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 RNU6-479P-201ENST00000516348 105 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 RNU6-948P-201ENST00000516374 107 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 SNORA74D-201ENST00000516404 141 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 AC112693.2-201ENST00000556538 232 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 AC005972.2-201ENST00000604690 348 ntBASIC2.67□□□□□ -1.98
NELFAQ9H3P2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NELFAQ9H3P2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
NELFAQ9H3P2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NELFAQ9H3P2 SNORD114-7-201ENST00000362520 77 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNY1P11-201ENST00000363759 113 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNU6-271P-201ENST00000363858 105 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNU6-728P-201ENST00000365375 104 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNU6-768P-201ENST00000384683 107 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNU2-32P-201ENST00000411193 191 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 AL135786.1-201ENST00000415892 214 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RPL23AP83-201ENST00000434984 473 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.66□□□□□ -1.98
NELFAQ9H3P2 AC016925.1-201ENST00000458303 298 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RPS27P22-201ENST00000478056 241 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNA5SP341-201ENST00000516261 117 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNU6-1234P-201ENST00000516877 103 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 RNA5SP490-201ENST00000517141 136 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 SNORA31.26-201ENST00000517250 137 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 AC007536.1-201ENST00000533382 349 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
NELFAQ9H3P2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NELFAQ9H3P2 AC127455.1-201ENST00000565496 145 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms