Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A11P48066 MIR1248-201ENST00000629190 106 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 Z82209.1-201ENST00000422141 2135 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 AL136360.1-201ENST00000503377 1900 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A11P48066 AC093831.2-201ENST00000624393 3427 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.92□□□□□ -1.94
SLC6A11P48066 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SLC6A11P48066 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RNU6-546P-201ENST00000383991 107 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RNU6-1117P-201ENST00000384525 104 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RNU6-417P-201ENST00000384712 107 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 MIR181A2-201ENST00000384863 110 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 MIR15B-201ENST00000385045 98 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 AL606845.1-201ENST00000404881 255 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 U6atac.2-201ENST00000408644 118 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 MICF-203ENST00000432679 129 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RPL23AP58-201ENST00000440453 469 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 HMGN2P18-201ENST00000450680 270 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RPL23AP54-201ENST00000495129 419 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 SNORA25.12-201ENST00000516202 82 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 AC104984.5-201ENST00000586878 94 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 POLR3GP1-201ENST00000594073 261 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 MIR5739-201ENST00000619803 80 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 MIR3658-201ENST00000636291 56 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SLC6A11P48066 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SLC6A11P48066 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.92□□□□□ -1.94
SLC6A11P48066 AL159152.1-201ENST00000635019 2587 ntBASIC2.92□□□□□ -1.94
SLC6A11P48066 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SLC6A11P48066 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
SLC6A11P48066 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SLC6A11P48066 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SLC6A11P48066 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 RNU6-1235P-201ENST00000384559 107 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 MIR569-201ENST00000385228 96 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 AC008134.1-201ENST00000420943 193 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 RNU6-498P-201ENST00000459468 107 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 RPS27P22-201ENST00000478056 241 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 RNA5SP380-201ENST00000517190 98 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 AC025647.1-201ENST00000517879 253 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A11P48066 MIR548X2-201ENST00000579776 100 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 DNAJC19P2-201ENST00000593340 302 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 AP003357.1-201ENST00000604497 148 ntBASIC2.91□□□□□ -1.94
SLC6A11P48066 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A11P48066 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A11P48066 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SLC6A11P48066 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SLC6A11P48066 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SLC6A11P48066 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SLC6A11P48066 RNU6-199P-201ENST00000362954 107 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 RNU4-13P-201ENST00000364019 141 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 SNORD37.2-201ENST00000391075 66 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 AL135786.1-201ENST00000415892 214 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 AL161788.1-201ENST00000441805 169 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 RNU6-561P-201ENST00000516222 102 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 RNU7-121P-201ENST00000516604 62 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 AC127455.1-201ENST00000565496 145 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 MIR5688-201ENST00000580619 83 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 AC005972.2-201ENST00000604690 348 ntBASIC2.9□□□□□ -1.95
SLC6A11P48066 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SLC6A11P48066 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SLC6A11P48066 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SLC6A11P48066 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A11P48066 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A11P48066 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A11P48066 Y_RNA.337-201ENST00000365312 102 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 RNU6-728P-201ENST00000365375 104 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 RNU6-643P-201ENST00000384018 107 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 RNU6-136P-201ENST00000384663 107 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 MIR513C-201ENST00000401352 84 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 AC063976.3-201ENST00000426849 329 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.89□□□□□ -1.95
SLC6A11P48066 AC100821.1-201ENST00000523153 2479 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC6A11P48066 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.89□□□□□ -1.95
SLC6A11P48066 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A11P48066 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A11P48066 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SLC6A11P48066 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC6A11P48066 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU1-23P-201ENST00000363361 144 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-1240P-201ENST00000365155 104 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-1323P-201ENST00000384025 107 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 SNORA20-201ENST00000384662 132 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-959P-201ENST00000384671 107 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-376P-201ENST00000384731 106 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-1228P-201ENST00000391014 107 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 Y_RNA.586-201ENST00000391146 98 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms