Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 SNORD9-201ENST00000362566 104 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU6-1204P-201ENST00000363948 107 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU6-580P-201ENST00000365159 107 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR617-201ENST00000385030 97 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AC067940.1-201ENST00000458411 300 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SL188P-201ENST00000469842 285 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 ZNF519P4-201ENST00000514008 125 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 RNVU1-2-201ENST00000516326 135 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR4286-201ENST00000580651 93 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR212-201ENST00000586026 110 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 RPSAP75-201ENST00000605848 301 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AC211486.4-201ENST00000621495 113 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 Z95114.1-201ENST00000624264 14574 ntBASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP383-201ENST00000362934 120 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 AL513328.1-201ENST00000446460 224 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SL267P-201ENST00000485107 261 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 AC023424.1-201ENST00000496058 459 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP96-201ENST00000516041 107 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR3157-201ENST00000578688 85 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6885-201ENST00000612241 66 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6133-201ENST00000617057 108 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6516-201ENST00000630554 81 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 AC108206.1-201ENST00000570186 4159 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 AL136164.3-201ENST00000624429 3978 ntBASIC2.85□□□□□ -1.95
KRTAP3-3Q9BYR6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU1-134P-201ENST00000362935 165 ntBASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU6V-201ENST00000384105 107 ntBASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 DEFB122-202ENST00000569013 197 ntBASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SL176P-201ENST00000580352 264 ntBASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR3616-201ENST00000584070 92 ntBASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 AC012368.3-201ENST00000604190 219 ntBASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
KRTAP3-3Q9BYR6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRTAP3-3Q9BYR6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 AP004607.3-201ENST00000530354 3915 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP295-201ENST00000362655 121 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP245-201ENST00000364239 121 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP500-201ENST00000364486 119 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA64.3-201ENST00000365647 134 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 RNU6-535P-201ENST00000384722 107 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORD125-201ENST00000459538 96 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 RN7SL393P-201ENST00000463588 296 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 RN7SL502P-201ENST00000481857 290 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 AC020914.4-201ENST00000597690 277 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms